AMCG00020214


Basic Information

Item Value
gene id AMCG00020214
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 13338553 ~ 13343605 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020214
GACCGCATTGTTTCTCCAGAGACGGACAGCGGCTTCGTGGGGTCGGAGAGCAGCCGTCTGACGCCTGCGGTGTGCAGCCCCCAACACCAGAGGGTGAGAGTGAGAGATGAAAAGCTAACACCCCCCCCAGCTGCCACTCAGCGCCCCACACCTTCCACCCGCCGCTCCACTCCCAAGGAGGCCGACGGGATCCCAGGGGTCTCGAGGTCAGAGGTCAATGCAGGTAGAAACGGGCCGGTCCTGCCCAGCCCTTCCCCTGCCACCTCCCCCCAGCACTGGGGCAGTAGCATCAACAGCGAGTTCGAACCCGAGTCCTGCGCCACCCACAGTGAGTCGGAAGGGGAGGGTCACAGTGTCCTGAGCGCCTTCGCCAGGCCAGCCAATAAGCAACATTATCAGCAGCACAGCCCGTCCCCCTCAGCAGCACATCCTAATGGCAACTTGCGGAGAGCTCAGAGTTCTGGATTGCTGCTGCCCAATAGACATGAGGCGATCCAGGCATTGCATGAGGAAGTGTCCAGACTGAGGCAGCGACTGGAGGGCAGTCTGCGCAGATCCTCCGGCAACACCCCAGCCCCCAGTATGGCGCCCCCTGTGGCCCGGGGTGAGCCACTGCCCCGACCCCGACGCAGCTCCACGCCTGTCCTGAGAAGGGGGGAGAAAGGAGGACGAGGATGGAGGAGAAGAGGTAGTGCAAGAGGACAGGGAGCCCCTCAGACCAACCCCGCGGCGAAGATCAGCGTCCCCAGTGATTCTGACCGTGTCCAGTCCCTGCCCCGACCCCAGTCCTCCAGACCTGTCCCAGCATCCTTTGCTGCACAGCGGAGCAGGAAGAGAGCAGGGGAGCACATCCAGGAAGCCGTGACGTTTCGGGGGCCCTATACAGGTgagggaggtgggGTGCCCCCCCATGGCCACACCCCCCCCCGCCACTGTCCCCTGTGCCGAGGGTCTGGAgtgcacagagagaggcaggcagaGCCAGGTGTTTGGACAGATCAAGACTCTGGCTCCACCCCCCGAGGCAGGCAGCCAATGGCATCTCCCCGGAAGGCGAAGAGGGGTGTGTTCGTGACGGCCCCGCCCCCTCCCACACTGGGTAGTGTGCCTGTGATCCAGTGTGTGCCCATGTGCCCACAGCCTGTCCTGTATTACTCCACCCCCCTCTCCAATGCCCCTTCCTCCTACGCGGAGCCCCGTCTCTACCTCTCGGTGGGTGGGGtctcaggggtcaggggtcagagaGCGCGGGGGGCCAGGCAGGTGCGTTCCCTGAGCCTTGAGGAGGGCGTCGCTGCGGACACGCTCAGCCGCTCTCTGAGCCGCGCCATCGAGGCAGCGTGCAGCATGCGGGAGGCGTCCCGGCGCATGGCGACCTCGCTGAGCACTGGGCTGCACCAGCAGGGGGCGCTACGGCAGTCCTGCCACTACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020214 True 1434 mRNA 0.65 9 13338553 13343605

Neighbor

gene id symbol gene type direction distance location
AMCG00020207 NA coding downstream 65157 13255533 ~ 13273396 (-)
AMCG00020211 LOC107584610 coding downstream 90925 13237915 ~ 13247628 (-)
AMCG00020209 nelfb,LOC106579998 coding downstream 103157 13230008 ~ 13235396 (-)
AMCG00020208 NA coding downstream 133564 13199720 ~ 13204989 (-)
AMCG00020210 NA coding downstream 158367 13170986 ~ 13180186 (-)
AMCG00020215 NA coding upstream 623 13344228 ~ 13351669 (-)
AMCG00020216 whrn,dfnb31a,LOC107661489,LOC107692282 coding upstream 25043 13368648 ~ 13387997 (-)
AMCG00020221 NA coding upstream 56509 13400114 ~ 13403240 (-)
AMCG00020219 NA coding upstream 65100 13408705 ~ 13427411 (-)
AMCG00020220 NA coding upstream 126205 13469810 ~ 13470856 (-)
G61696 NA non-coding downstream 452 13337016 ~ 13338101 (-)
G61593 NA non-coding downstream 330887 13007422 ~ 13007666 (-)
G61558 NA non-coding downstream 533120 12804670 ~ 12805433 (-)
G61550 NA non-coding downstream 595116 12719367 ~ 12743437 (-)
G61488 NA non-coding downstream 754805 12578671 ~ 12583748 (-)
G61729 NA non-coding upstream 103397 13447002 ~ 13450062 (-)
G61803 NA non-coding upstream 234804 13578409 ~ 13653379 (-)
G61872 NA non-coding upstream 407479 13751084 ~ 13751298 (-)
G61920 LOC107746475,LOC107567702,LOC107595988,LOC107697985 non-coding upstream 445786 13789391 ~ 13792931 (-)
G61927 NA non-coding upstream 478143 13821748 ~ 13823540 (-)
AMCG00020212 NA other downstream 114041 13216996 ~ 13224512 (-)
G61589 NA other downstream 340330 12997838 ~ 12998223 (-)
AMCG00020180 tubb2b,tubb4b,tbb2c,LOC103372938,LOC106580001,LOC100136483,LOC105029894,LOC103045037,LOC105891054,LOC105023713,LOC106593669,LOC108260450,LOC108241762,LOC106575097 other downstream 828616 12484369 ~ 12509937 (-)
AMCG00020159 NA other downstream 1286342 12001700 ~ 12052211 (-)
G61269 NA other downstream 1636908 11695691 ~ 11701645 (-)
AMCG00020230 NA other upstream 251913 13595518 ~ 13596917 (-)
AMCG00020229 NA other upstream 320471 13664076 ~ 13665592 (-)
AMCG00020252 atp6v1g1,LOC107566902,LOC108259956 other upstream 461415 13805020 ~ 13808333 (-)
AMCG00020256 NA other upstream 467808 13811413 ~ 13813003 (-)
AMCG00020249 NA other upstream 481084 13824689 ~ 13834729 (-)

Expression


Co-expression Network