AMCG00020218



Basic Information


Item Value
gene id AMCG00020218
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 13436742 ~ 13451791 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00020218
ATGGGTCTGGACTGCGCCCTGAAGCGACGAGAGCTTTGTCCACCAGGCTCCACACACTGTGGCCCCTGCATCGCCCCGTTGGTTGAGGACGAGCTCAAGAACTGCGTCAGGAAGAAGCATTCCCAAACTGAGGGTATCTGTGTCAGCTGGGTCTCTGCCCCCCTCTTCACCTCAGgtaagGTTAGCTCTATGCCTGAGCTGGACGAGGAGATAGACTTCCTGTCCTCCATCATCGCCAAAGAACAGGAATCAGTTGGCGCCTCCTCTGCTGTTTCTGGGCCCCCGCCACAGTCTGACCCTAAGAAGAATGACCCAACAGGGCCAGTCCGCAGTCACACCCCAATGCCAACGAGACGCCCCGgatccaccaccaccaccaccactgtgCCGCCCCCCACCAAATCGGCAGTGCGCAGCGGCCCTGTGACCACGCCTTACGCCCGCAACGACACCCTACTCATCAGTGCTAATGATTGCGGTGTGTATACTGGTGGGGACAGCTGCTCTGATAGTGGCTGGGATATGCTGGGTCAGAAGGTGGATTACCCTGCGTTTGGAGTGATGGGGCCCAACTCCTTCGACAGCACCTCGGTGAGTAGGGCCATGATGAGAACAgcgagtCCTGGAGATAAGAAGCTGGCTCACAGTGCCCAGATGTACCACTATCAGCACCAGAAGCAGCAGATGTTGTCTATGGAGAAGCACACAGACGAGCCGAAGGTCCCTGACTCCGGGACGACTACAGATGAGGAGAACGAGGATGGAGACTTCACTGTGTACGAGTGTCCGGGGCTGGCGCCGGCAGTGCCAATGGGAACCCTGACCCTCGCTAGCTGCTGCCACCAGATGCTCAGCTGTGTTTGGCGATACGTGTGCTGGGCATCACCCAGGCCCTCCTCCTTGATCTGA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00020218 True 909 mRNA 0.59 10 13436742 13451791

Neighbor


gene id symbol gene type direction distance location
AMCG00020213 LOC102780640 coding upstream 106565 13303410 ~ 13330177 (+)
AMCG00020206 NA coding upstream 181451 13248757 ~ 13255291 (+)
AMCG00020192 NA coding upstream 621410 12802058 ~ 12815332 (+)
AMCG00020191 nrarpa,nrarp coding upstream 701529 12734875 ~ 12735213 (+)
AMCG00020187 NA coding upstream 746397 12664908 ~ 12690345 (+)
AMCG00020217 pou5f3 coding downstream 4888 13456679 ~ 13461481 (+)
AMCG00020225 NA coding downstream 61763 13513554 ~ 13516767 (+)
AMCG00020223 abca2 coding downstream 93620 13545411 ~ 13579175 (+)
AMCG00020222 clic4,LOC107661585,LOC107595720,LOC108436785,LOC106563124,LOC107692326,LOC107736903 coding downstream 131490 13583281 ~ 13585950 (+)
AMCG00020226 NA coding downstream 140305 13592096 ~ 13595451 (+)
G61676 NA non-coding upstream 85208 13351248 ~ 13351534 (+)
G61674 NA non-coding upstream 87596 13348855 ~ 13349146 (+)
G61672 NA non-coding upstream 92703 13343757 ~ 13344039 (+)
G61671 NA non-coding upstream 93361 13343143 ~ 13343381 (+)
G61670 NA non-coding upstream 93729 13342680 ~ 13343013 (+)
G61774 NA non-coding downstream 143723 13595514 ~ 13596726 (+)
G61841 NA non-coding downstream 257044 13708835 ~ 13709496 (+)
G61871 LOC100846954 non-coding downstream 299296 13751087 ~ 13751363 (+)
G61904 NA non-coding downstream 425520 13877311 ~ 13930740 (+)
G61895 NA non-coding downstream 436360 13888151 ~ 13890428 (+)
G61675 NA other upstream 86030 13349677 ~ 13350712 (+)
G61491 NA other upstream 816925 12615792 ~ 12619817 (+)
AMCG00020177 NA other upstream 894481 12519764 ~ 12542261 (+)
AMCG00020171 rpl12 other upstream 1021791 12408962 ~ 12414951 (+)
AMCG00020143 pbx3,LOC107669256,LOC108434408 other upstream 2136710 11274024 ~ 11300032 (+)
AMCG00020245 LOC107746475,LOC107567702,LOC107595988 other downstream 335223 13787014 ~ 13792944 (+)
G61894 NA other downstream 381379 13833170 ~ 13834832 (+)
AMCG00020255 NA other downstream 411686 13863477 ~ 13872645 (+)
AMCG00020241 cdc26,LOC107743800,LOC107691734,LOC107603191 other downstream 431034 13882825 ~ 13885116 (+)
AMCG00020267 NA other downstream 496635 13948426 ~ 13951047 (+)

Expression



Co-expression Network