AMCG00020219


Basic Information

Item Value
gene id AMCG00020219
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 13408705 ~ 13427411 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020219
ATGGCATTCATTAGACTACCAGCAAGTCCAGAGTACGGAGCGAGTATGGTGCGACTACAGCGCAGGGACGAGGCAGCGTCGCCGCCCCGGAGTCAGCAGTCACAGTGGCTCCAAGAGGAGTGTGTTCTCATTCTGTACCATTTCACCTTGACCCTCGCCCACCCCACCGCGTCCTCGGAGATTCAATACGGCTTAGCACCCAGCCCCGCCAGGGCGCTGCTGCTGGCGGCGCTTCGGTGCGCAGTGTGCGGAGGATGCGGAGCTGCGCGGTGCGTGGCGGACAGGCAGGACTGGGCAGGGGAGCTGGCGAGCTCCCggctggagagagaaagagggaggggggctGGGGGCACGTACAGTGCTGTCGTCATGACGCTCGCTAAACCGGTTATCTCAGCCGAGCAGACGACTCTCTGCCTGTCTGAAGCTCACCTGTACGCACCTGAACAGCACAGAGACGCTCTCTACAGCACAGAGGAACCATCTCTACAGCACAGAGACGCTCTCTACAGCACAGAGGAACCATCTCTACAGCACAGAGACGCTCTCTACAGCACAGAGGAACCATCTCTACACAGTACCATGCTGTACACGGAGCTGATCAGGCTGTGGAGTGAGGCAGTGGGTGCTGTTGACCGAAGGGACTGGGAGGCGGCACTGACCGCACTGGGGCAGATTTCTGAGCCCACGGCCCGCACGCTATTCACAACCGCCTCAATCCTGCTCACACTGGGCCGCCTGGAGCTCAccatcaaggctCTGGATCAGACTATTGCGAAGGATGAGCGTCTCGCTGTGGGCTTTTTCCAGAGGGCAGCTGTGCACATGCTGGCTGACAGgctggATGAGGCCCTGGGAGACTGCGCTTTGGCACAGAAGCACATGAGAGGAAACTCTGTCATTGACTACAGGCAGCTGGGGCTGCGCTACAAACTGTACAGCTGGcagaggCTTGAGGTGCTGAAGCCCCTCTTGGTCCCAGAGGTGATTCCCAATGATGACTTCGGAGGGTTCGAGCCTCTGAGGCTGCAGAAGCCGGGATACTACGAGCCCAAGGCCGCAGCACATGAGTCCCGATACATGCGTGTGCGGTCCAGGTACACAGCGCGGGGGCCAGGAGAGCTGCAGGTGCTGCGCGGGGAGCCCGTGTTCATGCTGGATGACAGCGGGAGTGATGGACAGGCCACCGTTATCTACGATGGACAGAAAGTCCAGCTACCCCTCTCTGTCCTGGAACCAATAGATGTCAACAAGCCCCAGAAGAAGGATTTGAAGAGTGTGCCCAAAGGAATCCCGCTGCCTCCAGACCTGAAGCCCCCCATGCGCCCGCAGTCCCGTGCCAGCCAGGCTGCCCCCCCACTGGATGCTCCAGGCAATCAGTTTCCCCCACCTGTCTCCCCATCCACTCCTGTCCCACCCGCCCTCACTAGCCCCTCTAGCCCTCTTccagccccccagccccactCAGGAGATGAAGTGCTTGAACAATCAGAGGCACAGAGGACAGCCAGAAAGAAGCTGGCAGGGGGCAGTGTGGAGGAGTCTGAGGTGGGCGACTCTGTGGTGGTTAAGGTCCACTACAGGTTCACCGTGGCTCTGAGTGTCCCCGTGAAGACACCGTACAGCAAACTGCGGGAGCGAATCGCACACAAACTGGGCCAGCCGTCCAATCAGCTCCGGCTCAGacacagagagaggggttcTCAGGTGATGAAGCCCCTCAGTGGGGTGGAGTtgcaggagctgctggagggGGCGGAGAATGGCAGAGCCACACTGTGGTGCCAgGACCCCCTGCTGGGCCGGCCCATCCTGTATCAGGTGGTGGCTCTGTACGACTATACTGCACAGGGGCCTGAGGACCTGGAGTTCAATGAGGGAGACACCATTGACATCTTGTCTGAAGTGAACGAGGAGTGGATGGAGGGGCACGTGGCTGGCAGCATTGGAATCTTCCCCAGGTGTTTCGTGTACCGCGAGGCTGATTCCTCCGTAGGCAGCATCAGCAGCCATGATGCCCAGACCATGTGACCAAGATGGACTGTAGCTCTCATCCCTGCCATACACACTGACCACACTTTtacaaccaccaccaccccatCTGGAGTGTTCTTTAACCCCACACCCTCCCTCCACTCCCCCAGACGCCCGGATTTCAATCTAGCTAATCTGGTTAATTTAATCACTTGATCCATTATTTTGAAGTAATTGGGGATACAAATCAGGAGCCACAGATTGTCATGGTGATTGTGTCATGggtgttgttgttggttgtGGTGAAGGTGGGGGTGAGTGTGCCTGTGGGCAGGTGGGGGAGGCATCCTGGTGCCAGGTAACCCAGTGTTCGCTGGGCAGCACTTGCACAGAATGTCAGTAACATTCCACGAGAGATGGGCAACATCACTTCCTCtaaggggtgtgtgtgtatgggggcgAATGCTGGTATTCCTCCGGGCTGCACCGTGACATTTAGTGGTGGTATTTCCAACAGTCCCTTATCTATGAAAGCTGTCTTGCTCTCTGCGGAGCCCTCTTCACCTCAAACCATCGCTTGGGTACTAACCTCGGTTGTTATTATAGAGAAGAACCTGTCAAAGCCAGATTGATAATGCAGGCAGTCCTACTGCTCGTTGCTCTGACGGTCACTTTGTATCTGTATTCTGTAGTGAGCTGATCTTTACTGACATCAGATTATCCATCCTAGCAGTGGCATTCTTCTCTATTGTGATAggtatagaaatatatatgtatatatttatatatacgcACCAGGTTCTGACTTACTGACTGAACCCCACTGCCTGAACCTAAACAGGCATTTTAGAACTATCAAAAATGATTCAGTAGAAGATATTGTAttgagaaagaaataaacatggCAAAAACGA

Function

GO:

id name namespace
GO:0004055 argininosuccinate synthase activity molecular_function

KEGG:

id description
ko05204 Chemical carcinogenesis - DNA adducts

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020219 True 2888 mRNA 0.56 18 13408705 13427411

Neighbor

gene id symbol gene type direction distance location
AMCG00020221 NA coding downstream 5465 13400114 ~ 13403240 (-)
AMCG00020216 whrn,dfnb31a,LOC107661489,LOC107692282 coding downstream 20708 13368648 ~ 13387997 (-)
AMCG00020215 NA coding downstream 57036 13344228 ~ 13351669 (-)
AMCG00020214 NA coding downstream 65100 13338553 ~ 13343605 (-)
AMCG00020207 NA coding downstream 135309 13255533 ~ 13273396 (-)
AMCG00020220 NA coding upstream 42399 13469810 ~ 13470856 (-)
AMCG00020224 NA coding upstream 158969 13586380 ~ 13588928 (-)
AMCG00020231 NA coding upstream 223178 13650589 ~ 13663220 (-)
AMCG00020237 NA coding upstream 244884 13672295 ~ 13684406 (-)
AMCG00020236 NA coding upstream 263516 13690927 ~ 13702190 (-)
G61696 NA non-coding downstream 70604 13337016 ~ 13338101 (-)
G61593 NA non-coding downstream 401039 13007422 ~ 13007666 (-)
G61558 NA non-coding downstream 603272 12804670 ~ 12805433 (-)
G61550 NA non-coding downstream 665268 12719367 ~ 12743437 (-)
G61488 NA non-coding downstream 824957 12578671 ~ 12583748 (-)
G61729 NA non-coding upstream 19591 13447002 ~ 13450062 (-)
G61803 NA non-coding upstream 150998 13578409 ~ 13653379 (-)
G61872 NA non-coding upstream 323673 13751084 ~ 13751298 (-)
G61920 LOC107746475,LOC107567702,LOC107595988,LOC107697985 non-coding upstream 361980 13789391 ~ 13792931 (-)
G61927 NA non-coding upstream 394337 13821748 ~ 13823540 (-)
AMCG00020212 NA other downstream 184193 13216996 ~ 13224512 (-)
G61589 NA other downstream 410482 12997838 ~ 12998223 (-)
AMCG00020180 tubb2b,tubb4b,tbb2c,LOC103372938,LOC106580001,LOC100136483,LOC105029894,LOC103045037,LOC105891054,LOC105023713,LOC106593669,LOC108260450,LOC108241762,LOC106575097 other downstream 898768 12484369 ~ 12509937 (-)
AMCG00020159 NA other downstream 1356494 12001700 ~ 12052211 (-)
G61269 NA other downstream 1707060 11695691 ~ 11701645 (-)
AMCG00020230 NA other upstream 168107 13595518 ~ 13596917 (-)
AMCG00020229 NA other upstream 236665 13664076 ~ 13665592 (-)
AMCG00020252 atp6v1g1,LOC107566902,LOC108259956 other upstream 377609 13805020 ~ 13808333 (-)
AMCG00020256 NA other upstream 384002 13811413 ~ 13813003 (-)
AMCG00020249 NA other upstream 397278 13824689 ~ 13834729 (-)

Expression


Co-expression Network