AMCG00020234


Basic Information

Item Value
gene id AMCG00020234
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 13760414 ~ 13767183 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020234
GGGTAGTGTTTAGTGGGTGAGATGGTAGCAGTAATACTAATagtatagtaatagtaataatcgtttgtaaattgtgtttttactttaactttacattcaatattaaaacagtaatattCGATGTAGTTTAAGGAAGGATAATATACAAAGTGCATGTTGGTGTGTGTAATCATGCTAGTGATTTAGCaagattacaaatgtatataatcttCGTCTATCCGCTAGCAAAATGCCAAAAATATTTTAGCAGGGCGGGAATGAGCTGCTGTGTGAGTCCTGGCAGTGATAGTGCCTTTCTCCTGCGAGCCGAAAGCGAAACCTGTCCCTCTCGAGGCTCCGTAGAAGCAAATCGCGTGTGTGTTCATAGTTGACTGGGGTCCGAGCGAAGGGCAGAGCGGTCGCGGTTCGGGTCGGTGATGTGCTGCAGGGCAGCGGGCGGCGGGTGTTGTCGCCTGGGGTTTGTACAGTGACAGTGAGCGCTACAGTCCACAGAACCGCGATGCTGGCGGCGGCTCGGAAGGTTGCAGCAGTGCGGGCCCGAGTACAGGGTCTCGGTGCAGtgtggcagtgtgagagatGGCAGCACTCTGAGCTGGGCTCCACAGTGCATCCTGGTGGTGAGGGTGGGTACTGTGGGCTGTACCCTGGACATGTGCCCACCAGCCCCCTGCAGAAGGCTCTGTTGGCAGTGGGCTCAGGTGTCGCTGCTCTCCTGGACCCCTACCGGCATGACAGTGTGGCAGTGCTCGGCGAGACTACGGGCCAGCTGGCTCTGCGCAGCCTGAGAGATCAGATGAAGAGAGACCCTGAGGGACAGAGCATCCTTCAGGAGCGTCCGCGGATCCGTCTCTCCACGCTGGACATGTCCGCACTGGGTGCCCTGCCTAACGGGACCCTGGGGAGGGAGTACCTGCGCTTCCTGCAGACCAACagGGTGACCCCAGACTCCCGGCTGGCCGTGCGCTTCGTGGATGATGAGGAGCTGGCGTATGTGATGCAGCGATACCGTGAGGTTCACGACCTCCTGCACACGCTACTGCACATGCCCACTAACATGCTGGGTGAAGTGGTGGTGAAGTGGTTTGAAGCTGCCCAGACTGGCCTGCCCATGTGCATGCTAGGAGCTGCACTGGGACCCCTGCGCCTCTCACCCAGGCGGCTGCAGCCCCTGGTGAGCACACTGGTACCGTGGGCGCTGCGCAGTGGCTGCAATGCCCGCTGTGTGCTGAGTGTATACTATGAGCAGCGTTGGGGACAGAACCTGGAGGAGCTGAGGGAGGAGCTGGGAATCGAGCCGCCCCCAGCCCTAAGGCATCGGAGAGGTGATCCATTGCAGCACTGATTGGTGGGCGGGACTTTGAAGGCTCATGGCTCTGCAGGGTCTCCAGATTTTTGTTCCAATCGGAGCTCCTAATACCGCGGTTTTAGCTTGGCTTCCCTGGCCCGGATTGACAGCTGGTTCTGACAGTGTGGACAATTCAGAGACCTGTAAACGCCACTGGGCTGGACTTTGTTCCTCCTCGAGATGGAGTGAAAGCCAGAGCtagggtcagaggtcagcactaggaccccccccc

Function

GO: NA

KEGG:

id description
K18586 COQ4; ubiquinone biosynthesis protein COQ4

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020234 True 1577 mRNA 0.56 7 13760414 13767183

Neighbor

gene id symbol gene type direction distance location
AMCG00020239 NA coding downstream 14981 13737734 ~ 13745433 (-)
AMCG00020233 NA coding downstream 29930 13723015 ~ 13730484 (-)
AMCG00020238 NA coding downstream 37466 13719430 ~ 13722948 (-)
AMCG00020240 NA coding downstream 45223 13711782 ~ 13715191 (-)
AMCG00020235 NA coding downstream 49745 13708816 ~ 13710669 (-)
AMCG00020253 fbxw5,LOC107595987 coding upstream 26014 13793197 ~ 13797273 (-)
AMCG00020248 NA coding upstream 33410 13800593 ~ 13804321 (-)
AMCG00020250 NA coding upstream 47039 13814222 ~ 13820396 (-)
AMCG00020258 tmem203,LOC106566747 coding upstream 70619 13837802 ~ 13838218 (-)
AMCG00020257 NA coding upstream 81161 13848344 ~ 13849084 (-)
G61872 NA non-coding downstream 9116 13751084 ~ 13751298 (-)
G61803 NA non-coding downstream 107035 13578409 ~ 13653379 (-)
G61729 NA non-coding downstream 310352 13447002 ~ 13450062 (-)
G61696 NA non-coding downstream 422313 13337016 ~ 13338101 (-)
G61593 NA non-coding downstream 752748 13007422 ~ 13007666 (-)
G61920 LOC107746475,LOC107567702,LOC107595988,LOC107697985 non-coding upstream 22208 13789391 ~ 13792931 (-)
G61927 NA non-coding upstream 54565 13821748 ~ 13823540 (-)
G61943 NA non-coding upstream 145989 13913172 ~ 13914166 (-)
G62066 NA non-coding upstream 578114 14345297 ~ 14401302 (-)
G62143 NA non-coding upstream 936328 14703511 ~ 14767563 (-)
AMCG00020229 NA other downstream 94822 13664076 ~ 13665592 (-)
AMCG00020230 NA other downstream 163497 13595518 ~ 13596917 (-)
AMCG00020212 NA other downstream 535902 13216996 ~ 13224512 (-)
G61589 NA other downstream 762191 12997838 ~ 12998223 (-)
AMCG00020180 tubb2b,tubb4b,tbb2c,LOC103372938,LOC106580001,LOC100136483,LOC105029894,LOC103045037,LOC105891054,LOC105023713,LOC106593669,LOC108260450,LOC108241762,LOC106575097 other downstream 1250477 12484369 ~ 12509937 (-)
AMCG00020252 atp6v1g1,LOC107566902,LOC108259956 other upstream 37837 13805020 ~ 13808333 (-)
AMCG00020256 NA other upstream 44230 13811413 ~ 13813003 (-)
AMCG00020249 NA other upstream 57506 13824689 ~ 13834729 (-)
G62011 NA other upstream 362495 14129678 ~ 14131569 (-)
G62061 NA other upstream 563339 14330522 ~ 14332407 (-)

Expression


Co-expression Network