AMCG00020239


Basic Information

Item Value
gene id AMCG00020239
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 13737734 ~ 13745433 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020239
atggggaggagagggagagaaggaagaaGAGATGACCGGGAGccagcagagagggagagagtaGTGACTCACAGGCTGCAGCCCTGCCTCCTGTCTCTCTGTAGCCCTGTCCCCTATCTCTCTGAAGCCCTATCTCCTGTTTCCCTGACTCCTGTCTCTCTGCAGCCCTGTCCCCTGTCTCACTGCAGCCCTAACTCCTGTCTCCCTCACACCGCTGACAGGTTGTGCAGAGAGCTGCACAGGGCCAGAGTAGTGTGGTGCAGCCTGGAACTGCCCACGGGCACACAGtacGGGATGGTGTTTGACGCAGGATCCACCCACACGTCTCTGTTCATGTACCGCTGGCCCGGAGGGAAGGAGAACAACACTGGAGTGGTGTCACAGGTACTGGTGTGTGACGTGGAGGGTCCTGGTATCTCGAGCTATGCAGGGGACCCCCCCGGGGCGGGGCGGAGCCTGCGGGCATGTCTGGACATGGCTCAGGCCTCCATCCCTGCTGACCGGCAGCAGAGCGCCCCCATCTACCTGGGCGCCACCGCGGGCATGAGGCTGCTGCAACATCCATCCTGCAGCCCCAAACTAAGGCTGACTTCCGGCTCTATGGCTACAACTACACTACCTGTGTTACGGCAAGGAGCAGGCCATGAGACAGCTGCAGGTCGCCTTGCTGCAGGCTACAAACTCACCATGACCATGAGTGACCTCTTCAACTCGCCCTGCGTCTCCAAGCCCTCGTCCATTGACCCTGTGACCTCAGTGACCTTCTCCGGTAGCAGTGACTCCGGGGAGTGCCACACGCTAGTCAGGAAAATCTTCAACCTGTCGGACTGTGCGTCTGCCCCCCAGTGCGGCTTCAACGGCGTCTACCAGCCAAACGTCACCGGACGCTTCTTTCTGCAGGCCCAGTACCCTGGGCAGAAGGAGCAGTACCTGCGAGATTACTGGACAGACATTGGCTGGACGCTGGGCTACATGCTGAACCTCACCAACCTGATCCCGGCAGAGCGGCCCCCGGAGGTAGTGAGGCAGCAGCGTGACCAATGGGCAGCAGCATCCTTCTTCATTGTCCTGTCCATCTTCCTCAGCCTGCTGGCTCTCGCTGTGCAGATCTGGAACCTGATTACTAAAGGAAAGGGAGGAGCAGGCGCTGCAGACTGA

Function

GO:

id name namespace
GO:0016787 hydrolase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020239 True 1158 mRNA 0.60 10 13737734 13745433

Neighbor

gene id symbol gene type direction distance location
AMCG00020233 NA coding downstream 7250 13723015 ~ 13730484 (-)
AMCG00020238 NA coding downstream 14786 13719430 ~ 13722948 (-)
AMCG00020240 NA coding downstream 22543 13711782 ~ 13715191 (-)
AMCG00020235 NA coding downstream 27065 13708816 ~ 13710669 (-)
AMCG00020236 NA coding downstream 35544 13690927 ~ 13702190 (-)
AMCG00020234 NA coding upstream 14981 13760414 ~ 13767183 (-)
AMCG00020253 fbxw5,LOC107595987 coding upstream 47764 13793197 ~ 13797273 (-)
AMCG00020248 NA coding upstream 55160 13800593 ~ 13804321 (-)
AMCG00020250 NA coding upstream 68789 13814222 ~ 13820396 (-)
AMCG00020258 tmem203,LOC106566747 coding upstream 92369 13837802 ~ 13838218 (-)
G61803 NA non-coding downstream 84355 13578409 ~ 13653379 (-)
G61729 NA non-coding downstream 287672 13447002 ~ 13450062 (-)
G61696 NA non-coding downstream 399633 13337016 ~ 13338101 (-)
G61593 NA non-coding downstream 730068 13007422 ~ 13007666 (-)
G61558 NA non-coding downstream 932301 12804670 ~ 12805433 (-)
G61872 NA non-coding upstream 5651 13751084 ~ 13751298 (-)
G61920 LOC107746475,LOC107567702,LOC107595988,LOC107697985 non-coding upstream 43958 13789391 ~ 13792931 (-)
G61927 NA non-coding upstream 76315 13821748 ~ 13823540 (-)
G61943 NA non-coding upstream 167739 13913172 ~ 13914166 (-)
G62066 NA non-coding upstream 599864 14345297 ~ 14401302 (-)
AMCG00020229 NA other downstream 72142 13664076 ~ 13665592 (-)
AMCG00020230 NA other downstream 140817 13595518 ~ 13596917 (-)
AMCG00020212 NA other downstream 513222 13216996 ~ 13224512 (-)
G61589 NA other downstream 739511 12997838 ~ 12998223 (-)
AMCG00020180 tubb2b,tubb4b,tbb2c,LOC103372938,LOC106580001,LOC100136483,LOC105029894,LOC103045037,LOC105891054,LOC105023713,LOC106593669,LOC108260450,LOC108241762,LOC106575097 other downstream 1227797 12484369 ~ 12509937 (-)
AMCG00020252 atp6v1g1,LOC107566902,LOC108259956 other upstream 59587 13805020 ~ 13808333 (-)
AMCG00020256 NA other upstream 65980 13811413 ~ 13813003 (-)
AMCG00020249 NA other upstream 79256 13824689 ~ 13834729 (-)
G62011 NA other upstream 384245 14129678 ~ 14131569 (-)
G62061 NA other upstream 585089 14330522 ~ 14332407 (-)

Expression


Co-expression Network