AMCG00020240


Basic Information

Item Value
gene id AMCG00020240
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 13711782 ~ 13715191 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020240
ATGCAACACCTGGACAATGGTTCCGCCCTGGTCACCTGGGACAGGAGCCAGCCTGAGAGCGGACTGGAGGTCACAAACAGTTTGCTGTGTGGGGAGCGACTGTTATACCGGGGGGGGGGCTGCTCCTTTACCCTCAGCCTCTCTGACCTGCACAACCCCTGTGGCCCCGCCCCCCCGCTCAGCCTAAGGCTGGTCCAATCTACGGCTGGCGGGGATGTCAGCCCCTGCAGCGCGGCCACGCTATTGGCCCTGGATAGAGAAAGACTGGAGCCGGAGCTGGAACCCCCCGGGCCCCCACTGGCCCTGCGGGTGCTCAGCTGCTCAGCGACATGGGTTCGTCTATGCTGGGCCCCCCCCAGTCAGGGCGCGGCTCCCCGAGCCTACCAGCTGCTGCGGGGGGGCGTTGTGCTGGAGTGCACCTCCCAGCTGAGCACTGTGGTGGGGGGGCTCTCGCCGGGGACGGAGTACGAGTTTGTGGTCCGGGGTCTGGGCACGGGGGTacaggtgggggagggggcgaGTGTCCGCGGACGCACTGCCGACCCCCTGACCCATGCGCCCAGCCGCCTCACAGTCACTGTGCTGGGCCGCAGGGAGCTGCAGGTCAGCTGGGGGGTGCCCGCGCTGCCCCTGGGGAAGCTGTTCAACTACCAGCTCAGCATCAATGGCAGCGTGGCATACCTGGGCACCGGCCACACCCACCATGCCCGCAGACTGCGGCCCAACACCCAGGAGATCACAGAGGTCAAGAGGTCAGGACCGCAGCCCGGCCAGAAGCCCAGAGCTCAGCTGTCCCTCAGTGGGGCTCCGGACAGACAGGCGGACGGCGGGAGAGACAGATGCAGAGCAAGGATGAGCTGGGGGGGGGGCCCAGGCAAGAGCACAGCGCCTCCTGGCAGTGCCCCCCTCTCCCTGCCGCCCCCCCTGCTGCTGCCCCACCGCGCCAAGACTGAGAGCCAGCTGCTGACACGGCAACAACCCTGGTTGGCACCGAGGGCCAGTGGGCTCACCTGGAGCAGggagGTGTCTTTGTGTGCACCCCCGCTTGCCCCCCCTGCTGACAGCTCTTGGGACCCCACTGAACTCCCCAATGCACTCAGACCAGGGGGCCACGCCAGCACAGCTGGCTTCTTTCAGGTGACACCATTCCCTGGCATGGACCcccaggtcagaggtcagaagCCCAGGCCAGTCAGGGTCAGCAGTGTGGCCAGATTGGGGGGGCGGCCCTTGGCGTCTGAAGACAGGCTGCTGGACAGCACCAGCTGA

Function

GO: NA

KEGG:

id description
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020240 True 1269 mRNA 0.67 6 13711782 13715191

Neighbor

gene id symbol gene type direction distance location
AMCG00020235 NA coding downstream 1113 13708816 ~ 13710669 (-)
AMCG00020236 NA coding downstream 9592 13690927 ~ 13702190 (-)
AMCG00020237 NA coding downstream 27376 13672295 ~ 13684406 (-)
AMCG00020231 NA coding downstream 48562 13650589 ~ 13663220 (-)
AMCG00020224 NA coding downstream 122854 13586380 ~ 13588928 (-)
AMCG00020238 NA coding upstream 4239 13719430 ~ 13722948 (-)
AMCG00020233 NA coding upstream 7824 13723015 ~ 13730484 (-)
AMCG00020239 NA coding upstream 22543 13737734 ~ 13745433 (-)
AMCG00020234 NA coding upstream 45223 13760414 ~ 13767183 (-)
AMCG00020253 fbxw5,LOC107595987 coding upstream 78006 13793197 ~ 13797273 (-)
G61803 NA non-coding downstream 58403 13578409 ~ 13653379 (-)
G61729 NA non-coding downstream 261720 13447002 ~ 13450062 (-)
G61696 NA non-coding downstream 373681 13337016 ~ 13338101 (-)
G61593 NA non-coding downstream 704116 13007422 ~ 13007666 (-)
G61558 NA non-coding downstream 906349 12804670 ~ 12805433 (-)
G61872 NA non-coding upstream 35893 13751084 ~ 13751298 (-)
G61920 LOC107746475,LOC107567702,LOC107595988,LOC107697985 non-coding upstream 74200 13789391 ~ 13792931 (-)
G61927 NA non-coding upstream 106557 13821748 ~ 13823540 (-)
G61943 NA non-coding upstream 197981 13913172 ~ 13914166 (-)
G62066 NA non-coding upstream 630106 14345297 ~ 14401302 (-)
AMCG00020229 NA other downstream 46190 13664076 ~ 13665592 (-)
AMCG00020230 NA other downstream 114865 13595518 ~ 13596917 (-)
AMCG00020212 NA other downstream 487270 13216996 ~ 13224512 (-)
G61589 NA other downstream 713559 12997838 ~ 12998223 (-)
AMCG00020180 tubb2b,tubb4b,tbb2c,LOC103372938,LOC106580001,LOC100136483,LOC105029894,LOC103045037,LOC105891054,LOC105023713,LOC106593669,LOC108260450,LOC108241762,LOC106575097 other downstream 1201845 12484369 ~ 12509937 (-)
AMCG00020252 atp6v1g1,LOC107566902,LOC108259956 other upstream 89829 13805020 ~ 13808333 (-)
AMCG00020256 NA other upstream 96222 13811413 ~ 13813003 (-)
AMCG00020249 NA other upstream 109498 13824689 ~ 13834729 (-)
G62011 NA other upstream 414487 14129678 ~ 14131569 (-)
G62061 NA other upstream 615331 14330522 ~ 14332407 (-)

Expression


Co-expression Network