AMCG00020241 (cdc26,LOC107743800,LOC107691734,LOC107603191)


Basic Information

Item Value
gene id AMCG00020241
gene name cdc26,LOC107743800,LOC107691734,LOC107603191
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 13882825 ~ 13885116 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020241
ATGCTGCGGCGGAAGCCCACCCGCATCGAGCTGAAGCTGGACGACATCGAGGAGTTTGACAGCGTAAAGAAGGAGCTGGAGAGCCGCAAGAAGCAGCGTGAGGAGGTGGATGTGGTGGGTGTGGCCAGCAGTGTGGAGGTAGGGGGGGCTGCAGCAGGGGGTGCAGAGGGCAAGACCCGGGAGCAAATGATAAACGAGCGGATTGGGTACAAGCCCCACCCCAAACCCAACACCCTGCCCTCCCTCTTTGGCAACCTGCAATTCTAG
>TU77507
CAGAGTAACTTCCTGTTTTTGTGGCGGAGTGAGCGGTGTACGAGGTCGCCCGACACGGCAGACAGCGAGGCGAGGACTGGCCGGGCCGGGAGAGCAGCGCGGTACCAAGCAAGTCTCTCTGTTGTCTGTCAGCCGGCAGGGGGCACTGCTGGGCTGTGTGTGGGAGGCGGGGAGTTCCTGAGTTGCCAAGTGGATCGTGCTGTCACAGGGCTGCAATGCTGCGGCGGAAGCCCACCCGCATCGAGCTGAAGCTGGACGACATCGAGGAGTTTGACAGCGTAAAGAAGGAGCTGGAGAGCCGCAAGAAGCAGCGTGAGGAGGTGGATGTGGTGGGTGTGGCCAGCAGTGTGGAGGTAGGGGGGGCTGCAGCAGGGGGTGCAGAGGGCAAGACCCGGGAGCAAATGATAAACGAGCGGATTGGGTACAAGCCCCACCCCAAACCCAACACCCTGCCCTCCCTCTTTGGCAACCTGCAATTCTAGAGGCTGCTGGGACACTCTGGTCACAAGTGGGCCGTCCCATAGTGTGGGCACCTTCAATATGCGCTCTCCAGACCATACCATCCCATGGCCCCAGGGAGGGGTGTTATGGTTGGCACCCTTTTTCTCACTGGTTTCACCCCGATTCTGCTGCCGCTTGTATGGAAAGTGCCAGGTGTACAGCCGATGCTTGGCTGTTAGGCAGCATAGTAACAGCAATGAAACACTGGAGGCAGCTGCGGAGGGGACACTCCACCCACCTGACCTTGGAGCCCCCCGCACACACAGCCGAAGACACGCAGGGCAGGCTGGCTGTGGTCTGCTCCGTCGCCCACTGACCTGACCACGGGTGTCTCCTCACAGCGCAACGCCAACCGAACTGTTTTCTGACCCATTCAAATGTCCCAGTGGCAGCGCTGCAGCGggttagtgtttgtgtgtggagcagccctgtcatttttttttaatttttaccattaatgcaaataaatctTTGACTGTTTGTTCAACCTGC

Function

symbol description
cdc26 Acts upstream of or within mitotic cell cycle and regulation of mitotic cell cycle. Predicted to be located in nucleus. Predicted to be part of anaphase-promoting complex. Is expressed in digestive system; head; and heart. Orthologous to human CDC26 (cell division cycle 26).

NR:

description
PREDICTED: anaphase-promoting complex subunit CDC26

GO:

id name namespace
GO:0031145 anaphase-promoting complex-dependent catabolic process biological_process
GO:0070979 protein K11-linked ubiquitination biological_process
GO:0030071 regulation of mitotic metaphase/anaphase transition biological_process
GO:0005680 anaphase-promoting complex cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020241 False 267 mRNA 0.61 2 13884088 13884605
TU77507 True 993 lncRNA 0.58 4 13882825 13885116

Neighbor

gene id symbol gene type direction distance location
AMCG00020246 NA coding upstream 5599 13875641 ~ 13877226 (+)
AMCG00020244 NA coding upstream 8526 13873781 ~ 13874299 (+)
AMCG00020243 alad,hem2,LOC106563307 coding upstream 35840 13839553 ~ 13846985 (+)
AMCG00020242 ssna1,LOC107697981,LOC107684356,LOC107730341,LOC107559739 coding upstream 58617 13821761 ~ 13824208 (+)
AMCG00020247 NA coding upstream 123150 13754935 ~ 13759675 (+)
AMCG00020259 LOC107754619,LOC107665231,LOC107662064,LOC108279335,LOC105902521,LOC108435469 coding downstream 13928 13899044 ~ 13911515 (+)
AMCG00020260 LOC106565473,LOC102201489,LOC106563238,LOC102777117 coding downstream 34475 13919591 ~ 13944753 (+)
AMCG00020265 fhod1 coding downstream 69371 13954487 ~ 13956067 (+)
AMCG00020262 LOC108432357 coding downstream 88298 13973414 ~ 13975559 (+)
AMCG00020264 fhod1,LOC107740454,LOC106562854,LOC107553095 coding downstream 102964 13988080 ~ 13995139 (+)
G61871 LOC100846954 non-coding upstream 131462 13751087 ~ 13751363 (+)
G61841 NA non-coding upstream 173329 13708835 ~ 13709496 (+)
G61774 NA non-coding upstream 286099 13595514 ~ 13596726 (+)
G61676 NA non-coding upstream 531291 13351248 ~ 13351534 (+)
G61674 NA non-coding upstream 533679 13348855 ~ 13349146 (+)
G61895 NA non-coding downstream 3035 13888151 ~ 13890428 (+)
G62012 NA non-coding downstream 250182 14135298 ~ 14136287 (+)
G62013 NA non-coding downstream 251304 14136420 ~ 14136936 (+)
G62014 NA non-coding downstream 252310 14137426 ~ 14137829 (+)
G62039 NA non-coding downstream 356749 14241865 ~ 14288834 (+)
AMCG00020255 NA other upstream 10180 13863477 ~ 13872645 (+)
G61894 NA other upstream 47993 13833170 ~ 13834832 (+)
AMCG00020245 LOC107746475,LOC107567702,LOC107595988 other upstream 89881 13787014 ~ 13792944 (+)
G61675 NA other upstream 532113 13349677 ~ 13350712 (+)
G61491 NA other upstream 1263008 12615792 ~ 12619817 (+)
AMCG00020267 NA other downstream 63310 13948426 ~ 13951047 (+)
AMCG00020273 NA other downstream 310668 14195784 ~ 14232268 (+)
AMCG00020281 slc12a4 other downstream 582684 14467800 ~ 14472545 (+)
AMCG00020331 st3gal2,LOC107686287,LOC106573711,LOC107672232 other downstream 2697770 16582886 ~ 16604658 (+)
G62632 NA other downstream 2929258 16814374 ~ 16815857 (+)

Expression


Co-expression Network