AMCG00020254


Basic Information

Item Value
gene id AMCG00020254
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 13850330 ~ 13852469 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020254
atgaacacaaccAAAGGCAAAAGGATGGATACAGAGGAGGAAGGCTGTAATACTGAGGGGAGACCTGAGGAAGCCACAGCAAAGAACAGACAGGTACACATCAGCACAGCCAGTGGATACAGACAAGAGGAAACAAAAGGGAGACCCAGCGAGGGATCAGCAGCTGGGAGGAGGGACAGATACAGGCGAGGGAGGGACTCTCTGAGCAAAGAGGGTCCTCTCTACCTGCCCTGGGCACCGTCATTGTTTCTCTGTGCCGCCGACAGTCTGGGCATCGGGACAAGACGTGGAGCAGGCAAGCGTCTGTGTGTGCCCGTTGTCAAGATTGGCACTGCCCCCTGCCTCCCTGTGGCTGGCACTGAAGCACTGAACGCCGCAGGACATCGCCATCACCTGCGCAGCCTTGCCCACCCCACGACTGAGCTGGAGTCCAGCGAGATACTCCCAGTGCAGGCAGACCTCCACGCCAGGGGGGGCGTTGCAGGGCTCCCTATGGCTCAAGTGGAGAGTGATGGTGAGGACACTGGCAACCATGTGACCGCCCACTCAGAGCAGAGGATCTGA

Function

GO:

id name namespace
GO:0007626 locomotory behavior biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020254 True 564 mRNA 0.59 4 13850330 13852469

Neighbor

gene id symbol gene type direction distance location
AMCG00020257 NA coding downstream 1246 13848344 ~ 13849084 (-)
AMCG00020258 tmem203,LOC106566747 coding downstream 12112 13837802 ~ 13838218 (-)
AMCG00020250 NA coding downstream 29934 13814222 ~ 13820396 (-)
AMCG00020248 NA coding downstream 46009 13800593 ~ 13804321 (-)
AMCG00020253 fbxw5,LOC107595987 coding downstream 53057 13793197 ~ 13797273 (-)
AMCG00020251 prpf4,LOC107721635,LOC107743802,LOC107663789,LOC107691731 coding upstream 24813 13877282 ~ 13882189 (-)
AMCG00020261 slc31a1 coding upstream 33915 13886384 ~ 13890531 (-)
AMCG00020270 tppp3,LOC106588035 coding upstream 285943 14138412 ~ 14145684 (-)
AMCG00020269 NA coding upstream 296105 14148574 ~ 14169641 (-)
AMCG00020274 atp6v0d1,LOC106588021,LOC103462946 coding upstream 389396 14241865 ~ 14249749 (-)
G61927 NA non-coding downstream 26790 13821748 ~ 13823540 (-)
G61920 LOC107746475,LOC107567702,LOC107595988,LOC107697985 non-coding downstream 57399 13789391 ~ 13792931 (-)
G61872 NA non-coding downstream 99032 13751084 ~ 13751298 (-)
G61803 NA non-coding downstream 196951 13578409 ~ 13653379 (-)
G61729 NA non-coding downstream 400268 13447002 ~ 13450062 (-)
G61943 NA non-coding upstream 60703 13913172 ~ 13914166 (-)
G62066 NA non-coding upstream 492828 14345297 ~ 14401302 (-)
G62143 NA non-coding upstream 851042 14703511 ~ 14767563 (-)
G62191 NA non-coding upstream 1179666 15032135 ~ 15034076 (-)
G62283 LOC107575789 non-coding upstream 1570686 15423155 ~ 15423574 (-)
AMCG00020249 NA other downstream 15601 13824689 ~ 13834729 (-)
AMCG00020256 NA other downstream 37327 13811413 ~ 13813003 (-)
AMCG00020252 atp6v1g1,LOC107566902,LOC108259956 other downstream 41997 13805020 ~ 13808333 (-)
AMCG00020229 NA other downstream 184738 13664076 ~ 13665592 (-)
AMCG00020230 NA other downstream 253413 13595518 ~ 13596917 (-)
G62011 NA other upstream 277209 14129678 ~ 14131569 (-)
G62061 NA other upstream 478053 14330522 ~ 14332407 (-)
AMCG00020316 cnep1r1,tm188,LOC106587574,LOC107551481,LOC107554612 other upstream 2246431 16098900 ~ 16102739 (-)
G62409 NA other upstream 2266520 16118989 ~ 16120153 (-)
G62415 NA other upstream 2400319 16252788 ~ 16255119 (-)

Expression


Co-expression Network