Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00020271 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030127.1 |
| NCBI id | CM030127.1 |
| chromosome length | 42978078 |
| location | 14257572 ~ 14259160 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| K05231 | AGRP; agouti related protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00020271 | True | 468 | mRNA | 0.65 | 3 | 14257572 | 14259160 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00020268 | LOC106594058 | coding | upstream | 158923 | 14085133 ~ 14098649 (+) |
| AMCG00020266 | NA | coding | upstream | 201842 | 14052358 ~ 14055730 (+) |
| AMCG00020263 | NA | coding | upstream | 235245 | 14000227 ~ 14022327 (+) |
| AMCG00020264 | fhod1,LOC107740454,LOC106562854,LOC107553095 | coding | upstream | 262433 | 13988080 ~ 13995139 (+) |
| AMCG00020262 | LOC108432357 | coding | upstream | 282013 | 13973414 ~ 13975559 (+) |
| AMCG00020272 | LOC108432371 | coding | downstream | 2822 | 14261982 ~ 14272204 (+) |
| AMCG00020277 | LOC102693979 | coding | downstream | 35573 | 14294733 ~ 14302999 (+) |
| AMCG00020275 | dus2,LOC108229071,LOC106942792 | coding | downstream | 55232 | 14314392 ~ 14332409 (+) |
| AMCG00020276 | NA | coding | downstream | 80675 | 14339835 ~ 14383230 (+) |
| AMCG00020279 | amfr,LOC107566269 | coding | downstream | 179918 | 14439078 ~ 14450651 (+) |
| G62014 | NA | non-coding | upstream | 119743 | 14137426 ~ 14137829 (+) |
| G62013 | NA | non-coding | upstream | 120636 | 14136420 ~ 14136936 (+) |
| G62012 | NA | non-coding | upstream | 121285 | 14135298 ~ 14136287 (+) |
| G61904 | NA | non-coding | upstream | 326832 | 13877311 ~ 13930740 (+) |
| G61895 | NA | non-coding | upstream | 367144 | 13888151 ~ 13890428 (+) |
| G62062 | NA | non-coding | downstream | 86136 | 14345296 ~ 14401302 (+) |
| G62108 | NA | non-coding | downstream | 295696 | 14554856 ~ 14621700 (+) |
| G62114 | NA | non-coding | downstream | 307559 | 14566719 ~ 14567438 (+) |
| G62118 | NA | non-coding | downstream | 318347 | 14577507 ~ 14578702 (+) |
| G62185 | NA | non-coding | downstream | 772882 | 15032042 ~ 15034083 (+) |
| AMCG00020273 | NA | other | upstream | 25304 | 14195784 ~ 14232268 (+) |
| AMCG00020267 | NA | other | upstream | 306525 | 13948426 ~ 13951047 (+) |
| AMCG00020241 | cdc26,LOC107743800,LOC107691734,LOC107603191 | other | upstream | 372456 | 13882825 ~ 13885116 (+) |
| AMCG00020255 | NA | other | upstream | 384927 | 13863477 ~ 13872645 (+) |
| G61894 | NA | other | upstream | 422740 | 13833170 ~ 13834832 (+) |
| AMCG00020281 | slc12a4 | other | downstream | 208640 | 14467800 ~ 14472545 (+) |
| AMCG00020331 | st3gal2,LOC107686287,LOC106573711,LOC107672232 | other | downstream | 2323726 | 16582886 ~ 16604658 (+) |
| G62632 | NA | other | downstream | 2555214 | 16814374 ~ 16815857 (+) |
| AMCG00020370 | NA | other | downstream | 3174482 | 17433642 ~ 17442711 (+) |
| AMCG00020371 | nutf2 | other | downstream | 3199984 | 17459144 ~ 17471869 (+) |
