AMCG00020277 (LOC102693979)


Basic Information

Item Value
gene id AMCG00020277
gene name LOC102693979
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 14294733 ~ 14302999 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020277
ATGGACGGGGGCTCACTGTTCTCCAGCAACGATACCTACATCTGGGGCGACAGTGCGGGACACCTGAACCACACCGGCGACAAGGACGGGGGCCCGGAGGTGGTGATAGTGCCCATCGTGTTCGGGGTCATTTTCCTCCTGGGCATCATCGGGAACACTCTGGTGATGATCGTGATCGGGAGGATCAAGTCCCGGCGCTCCAGGAGCATCACCAACACGTTCATCCTGAACCTCAGCATCGCGGACCTGTCCTTCCTGCTGTTCTGCGTGCCGTTCCAAGCCACCATCTACTCGCTGCCCGAGTGGATCTTCGGCGCCTTCCTGTGCAAATTCGTGCACTACTTCGTGATGGTCAGCATGCTGGTGAGCATCTTCACGCTGGTGGCGATGTCGGTGGACAGATACATCGCCGTGGTTCACTCCAAGCGCTCGCCCTGCATCCGAAACAAGAAGAACGCCTCGATCGGTGTGGCAGTGATCTGGGTGCTCTCCTTCGTCTTCGCCATCCCGGTGGCACAACACCAGACCATCACCAGCCACCAGGAAGCCCCCAACAGCTCGTTCTGCTGGGAGGAGTGGGCTGACAGCGCCACCAAACACACGTATAAAGTGACTATTTTGATCATTGGGTACCTGCTGCCCCTGGTGTTAATCACATGCTGTTATGCAAAGAGGGGACTGGAGCTGCCCTTGCTGGCTGTGTGGCAAGGTTGGCCCGAGTTCTCTGAGGTGTGCATCCGCAATGAGGCTCGGCTCTGA

Function

NR:

description
PREDICTED: galanin receptor type 1-like isoform X1

GO: NA

KEGG:

id description
K04230 GALR1; galanin receptor 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020277 True 759 mRNA 0.58 2 14294733 14302999

Neighbor

gene id symbol gene type direction distance location
AMCG00020272 LOC108432371 coding upstream 22529 14261982 ~ 14272204 (+)
AMCG00020271 NA coding upstream 35573 14257572 ~ 14259160 (+)
AMCG00020268 LOC106594058 coding upstream 196084 14085133 ~ 14098649 (+)
AMCG00020266 NA coding upstream 239003 14052358 ~ 14055730 (+)
AMCG00020263 NA coding upstream 272406 14000227 ~ 14022327 (+)
AMCG00020275 dus2,LOC108229071,LOC106942792 coding downstream 11393 14314392 ~ 14332409 (+)
AMCG00020276 NA coding downstream 36836 14339835 ~ 14383230 (+)
AMCG00020279 amfr,LOC107566269 coding downstream 136079 14439078 ~ 14450651 (+)
AMCG00020280 NA coding downstream 148776 14451775 ~ 14461301 (+)
AMCG00020292 NA coding downstream 686031 14989030 ~ 14990430 (+)
G62039 NA non-coding upstream 5899 14241865 ~ 14288834 (+)
G62014 NA non-coding upstream 156904 14137426 ~ 14137829 (+)
G62013 NA non-coding upstream 157797 14136420 ~ 14136936 (+)
G62012 NA non-coding upstream 158446 14135298 ~ 14136287 (+)
G61904 NA non-coding upstream 363993 13877311 ~ 13930740 (+)
G62062 NA non-coding downstream 42297 14345296 ~ 14401302 (+)
G62108 NA non-coding downstream 251857 14554856 ~ 14621700 (+)
G62114 NA non-coding downstream 263720 14566719 ~ 14567438 (+)
G62118 NA non-coding downstream 274508 14577507 ~ 14578702 (+)
G62185 NA non-coding downstream 729043 15032042 ~ 15034083 (+)
AMCG00020273 NA other upstream 62465 14195784 ~ 14232268 (+)
AMCG00020267 NA other upstream 343686 13948426 ~ 13951047 (+)
AMCG00020241 cdc26,LOC107743800,LOC107691734,LOC107603191 other upstream 409617 13882825 ~ 13885116 (+)
AMCG00020255 NA other upstream 422088 13863477 ~ 13872645 (+)
G61894 NA other upstream 459901 13833170 ~ 13834832 (+)
AMCG00020281 slc12a4 other downstream 164801 14467800 ~ 14472545 (+)
AMCG00020331 st3gal2,LOC107686287,LOC106573711,LOC107672232 other downstream 2279887 16582886 ~ 16604658 (+)
G62632 NA other downstream 2511375 16814374 ~ 16815857 (+)
AMCG00020370 NA other downstream 3130643 17433642 ~ 17442711 (+)
AMCG00020371 nutf2 other downstream 3156145 17459144 ~ 17471869 (+)

Expression


Co-expression Network