AMCG00020280


Basic Information

Item Value
gene id AMCG00020280
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 14451775 ~ 14461301 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020280
GTTTAGGTCTAGTGCTGCGGTTCATAACTGTTACATATCCTGCACAGCGCAGAGTGGATCGGTATAAGAGAGGGATCATATTCTGGGTGGGGACAATGCATCTGCTCTCTGTGGCGGCTGTGTTTTCTGCCATACCAGTACACACAACGTATTGACTGGATCCAACGGGACTGACATGGCTGTGTGGAGCTGCCCCCCATCCCAGTGCTCAGGTTTCTGGTTCCGGCCTGTGGAGCTGCTATTTCTCAGTCTGCTGTGCACAGGGTCCGTGGCCACCAGTCTGGAGGAGAGGACTTTGAACCTTCTGTCACGAGAACGCCTGATCGACGGGCACAACGATCTGGCGCTGAAGATGAGAATCATATACGATAACCAGCTGAGCAAGGTGGACCTGCGGAAAATCCCCCAAACTGCCACGGACATCTCTCGCATGCAGGCTGGACACATTGGAGCGCAGGTGTTTTCGGCCTATGTGATGTGCACGGCGCAGGAGAAGGACGCGGTGCGGCTCACCCTGGAGCAGGTGGACTTGATCCTCCGCATGTGCAATGAGTAcgaggagctggagctggtcACCACCGCTGCAGGCATGAGGAACACGAAGAAGATCGCCTGCTTGATCAGCATTGAGGGAGGGCACTCCATCGACAGCAGCCTGCCCACCTTGCGGATGTTCTACCAGCTGGGTGTGCGCTCCCTGGCACTCACGCACACTTGTAACACACCCTGGGCAGAATCATCCTCCAAGATCTACCCATTTTACAAAAGAGGAAACAACAGCCTGACTGATTTTGGGAAGGAGGTGGTGCTGGAGATGAACCGACTGGGCATGCTGATTGACCTGTCGCACAGCTCAAAGGGGACGGCCTGGGCGGTGCTGAATGTGTCCCGCGCCCCCGTCATCTTCAGCCACTCCTCTGCCGATGCGGTCTGTCCCCACATCCGCAACGTGCCCGATGACCTGCTGCTCAGAATGGTGAGGCGTGAACACAGCCACCCGCGAAAAGAAACACGTGGCCTGATCATGGTGAACCTGTACAGTGACTTTGTGGCCTGCGGACAGAAGGGCAACATCTCCATTGTAGCAGACCATTTCGATCACATCAAGAAGGTGGCCGGTGCAGAGTCCATCGGGATCGGGGGAGACTACGACGGAGCCTCTGGGTTCCCCGACGGCCTGGAGGACGTGTCCAAGTACCCGGCCCTTATCCAGGAGTTGCTGAGCCGAGGCTGGAGCGAGAACGAGCTGGCAGGGGTCCTGCGCAACAACTTCCTGCGGGTGTTCGAGGAGGTGGAGCAGGTACGCGATAAAAGTAAACGGCAGCTTCCCAGCGAATCACAGATCCCGCAGTCAGAGGCTGCGAACCCGTGTCGGCTGGTCCTGCGCCCACCACCCATCAACCCCCGGAATCACGCTGCCCACCCCGCTGTGCCCTGGCTCTTCACCGTCTCTGCTGTGTGCGCCACCCTTCACTCCTTCCTCTCTGGTGGCAGTACTATATAACCTCTCCTGGGCTTGGCTCCTGACCTGTGTATGGCTAGTGTGCTTGAAATGTTATACATATCTGTACAGCAATAGCACAATGTAACATTATTGCACGTCTGAAATTAGTTTTGCATGTAGCCTACTGTAGCACTTTACCTGACAGCATTACAAATCCTTACAAATGTGAATATAGTCCAGTTATAAGAGTCGCTACATAAATCGAAGGCCTTTACTCTCACATTCTGGTGCAGTGCCTGTGGATTTGTATGGAAACAATgcattaaactaaaaataatgttattaatcaGTAATAGAAGTTTGCTTCTGCTTCTAATAGTCTCATATTATTGAAATCTGAGAGCTGCCTTGCATTTGTGGCCTTTTTAAGTCACAGATTCCAGCCCGCTCGGAGTCCATGTTGAGAGTCCCCACCCCCCTCTacaatgtattttgcatatctGTGACCATGTTTGTCTTTTCAGCCGTATAGAGTCAATAGTTACcctaatatgtaaattaaattgtagcCTTGGTAACTTCCTATTCCTCCTTCCTCTACAATGTGCAATGGTGCTTCTGCTTAAAGACACCCCCCCTCTTCTCAGGCCAGTGTCTGTGTATcagaaaggaaggaaaacaaacgGCAGCCTGAGTCCAGCCGAAATGTGTTAAACCTGTCAGACCAGTGTGAGAGTGCTGTAATGCCTGAATGCACTTTAATAAAACTCACTTCATTACAAGGGAGG

Function

GO: NA

KEGG:

id description
K01273 DPEP; membrane dipeptidase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020280 True 2232 mRNA 0.52 11 14451775 14461301

Neighbor

gene id symbol gene type direction distance location
AMCG00020279 amfr,LOC107566269 coding upstream 1124 14439078 ~ 14450651 (+)
AMCG00020276 NA coding upstream 68545 14339835 ~ 14383230 (+)
AMCG00020275 dus2,LOC108229071,LOC106942792 coding upstream 119366 14314392 ~ 14332409 (+)
AMCG00020277 LOC102693979 coding upstream 148776 14294733 ~ 14302999 (+)
AMCG00020272 LOC108432371 coding upstream 179571 14261982 ~ 14272204 (+)
AMCG00020292 NA coding downstream 527729 14989030 ~ 14990430 (+)
AMCG00020291 NA coding downstream 529407 14990708 ~ 14991451 (+)
AMCG00020298 NA coding downstream 699296 15160597 ~ 15165994 (+)
AMCG00020296 NA coding downstream 704713 15166014 ~ 15199292 (+)
AMCG00020295 NA coding downstream 750789 15212090 ~ 15218030 (+)
G62062 NA non-coding upstream 50473 14345296 ~ 14401302 (+)
G62039 NA non-coding upstream 162941 14241865 ~ 14288834 (+)
G62014 NA non-coding upstream 313946 14137426 ~ 14137829 (+)
G62013 NA non-coding upstream 314839 14136420 ~ 14136936 (+)
G62012 NA non-coding upstream 315488 14135298 ~ 14136287 (+)
G62108 NA non-coding downstream 93555 14554856 ~ 14621700 (+)
G62114 NA non-coding downstream 105418 14566719 ~ 14567438 (+)
G62118 NA non-coding downstream 116206 14577507 ~ 14578702 (+)
G62185 NA non-coding downstream 570741 15032042 ~ 15034083 (+)
G62251 chd9,LOC106562403 non-coding downstream 836446 15297747 ~ 15298181 (+)
AMCG00020273 NA other upstream 219507 14195784 ~ 14232268 (+)
AMCG00020267 NA other upstream 500728 13948426 ~ 13951047 (+)
AMCG00020241 cdc26,LOC107743800,LOC107691734,LOC107603191 other upstream 566659 13882825 ~ 13885116 (+)
AMCG00020255 NA other upstream 579130 13863477 ~ 13872645 (+)
G61894 NA other upstream 616943 13833170 ~ 13834832 (+)
AMCG00020281 slc12a4 other downstream 6499 14467800 ~ 14472545 (+)
AMCG00020331 st3gal2,LOC107686287,LOC106573711,LOC107672232 other downstream 2121585 16582886 ~ 16604658 (+)
G62632 NA other downstream 2353073 16814374 ~ 16815857 (+)
AMCG00020370 NA other downstream 2972341 17433642 ~ 17442711 (+)
AMCG00020371 nutf2 other downstream 2997843 17459144 ~ 17471869 (+)

Expression


Co-expression Network