AMCG00020283


Basic Information

Item Value
gene id AMCG00020283
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 14436796 ~ 14437815 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020283
ATGGATTCAGAAGATTCTCCCTGGCAGACATGGGTGGCTTGTGTAATTCTGGGACTGTCTTTCCTGGTGGGCACTCCAGGGAACCTGCTGGTGATCTGGACCATCTTGCGGCACATCCGGCCGCGCTCCCACACTGTGCTGCTCATCCTCAACCTGGCTGCCGCTGACCTGCTAGTCCTCATAACGCTGCCCCTGTGGATCTACTCCCTGGCGGATGCCTGGGTATTCGGCCAGGCCGCCTGCAAAGCCATGGTGTACGTCATCTATGCTTGCATGTACAGCAGCGTGTTCCTCATCTCCACTATGAGCGTGGAGCGCTGCGTGGCTGTCCTGCACCCCTTCGCCCTGCACGGCTGGAGGAAGGAGGGGGTGATGGCAAAGGTGCTGGCTGTCATTTGGGTCCTGGCCTTCGTCTTCAGCATCCCCGTCATCCTCACACACACCGTGGATGAAGAAGACGGGAGGATGCAGTGCACGTTCAGGCAGTATGCTTCCAATGCCCAGGAGATTGTTTGCCTGGTGCTCGAGACCTTGCTGGGATTTATCTTGCCCTTCTTCATACTGTCAGTGTGCTACAGCTGTGTGTGGAAGAGGATAAAGCAGATGACTTTCAAGTCCAAGCAGAAATCCACAGCCTTGATTGTCAGTGTGGTGATCGCTTTTGCCTTGTGCTGGTTGCCGCACCATGTGTGTAACGTCCTGTCTTTAGTGTCTCTGCTACTCCATGGAAATAACAAGAAAGTTGCTGATAATCTAGAAGACACCAGACTAATGCTGCACTATATCTCCGCAGCTTTAACATTCGTGAGCAGCTCTGTTAACCCCGTGTTGTACGCCTTCGCCGCTCGCAAGTTACGAAGCAGCTTCCGAGACTCTGGGATCAGAAAGCTTCTTCGCCACATCTCTAGCTCCAGCATGAACGAGGGGACCAACGAGCTAACGTTCGTGTCGAGAAGACTGAGCTCTCAGACTGACCAAGTCAACTGCAACACTGCTTCATCAATCCACCTGGCTGTTTGA

Function

GO:

id name namespace
GO:0007165 signal transduction biological_process
GO:0004871 obsolete signal transducer activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020283 True 1020 mRNA 0.54 1 14436796 14437815

Neighbor

gene id symbol gene type direction distance location
AMCG00020282 NA coding downstream 9532 14405783 ~ 14427264 (-)
AMCG00020278 NA coding downstream 122795 14312412 ~ 14314001 (-)
AMCG00020274 atp6v0d1,LOC106588021,LOC103462946 coding downstream 187047 14241865 ~ 14249749 (-)
AMCG00020269 NA coding downstream 267155 14148574 ~ 14169641 (-)
AMCG00020270 tppp3,LOC106588035 coding downstream 291112 14138412 ~ 14145684 (-)
AMCG00020284 NA coding upstream 1716 14439531 ~ 14440544 (-)
AMCG00020285 slc12a4,LOC107696691,LOC107548948,LOC107563468,LOC107740471,LOC107657107 coding upstream 24598 14462413 ~ 14484977 (-)
AMCG00020288 slc6a2,LOC103378986 coding upstream 59419 14497234 ~ 14545943 (-)
AMCG00020287 NA coding upstream 117049 14554864 ~ 14564641 (-)
AMCG00020286 NA coding upstream 126959 14564774 ~ 14578838 (-)
G62066 NA non-coding downstream 35494 14345297 ~ 14401302 (-)
G61943 NA non-coding downstream 522630 13913172 ~ 13914166 (-)
G61927 NA non-coding downstream 613256 13821748 ~ 13823540 (-)
G61920 LOC107746475,LOC107567702,LOC107595988,LOC107697985 non-coding downstream 643865 13789391 ~ 13792931 (-)
G61872 NA non-coding downstream 685498 13751084 ~ 13751298 (-)
G62143 NA non-coding upstream 265696 14703511 ~ 14767563 (-)
G62191 NA non-coding upstream 594320 15032135 ~ 15034076 (-)
G62283 LOC107575789 non-coding upstream 985340 15423155 ~ 15423574 (-)
G62475 NA non-coding upstream 2042715 16480530 ~ 16480990 (-)
G62580 NA non-coding upstream 2231082 16668897 ~ 16669511 (-)
G62061 NA other downstream 104389 14330522 ~ 14332407 (-)
G62011 NA other downstream 305227 14129678 ~ 14131569 (-)
AMCG00020249 NA other downstream 602067 13824689 ~ 13834729 (-)
AMCG00020256 NA other downstream 623793 13811413 ~ 13813003 (-)
AMCG00020252 atp6v1g1,LOC107566902,LOC108259956 other downstream 628463 13805020 ~ 13808333 (-)
AMCG00020316 cnep1r1,tm188,LOC106587574,LOC107551481,LOC107554612 other upstream 1661085 16098900 ~ 16102739 (-)
G62409 NA other upstream 1681174 16118989 ~ 16120153 (-)
G62415 NA other upstream 1814973 16252788 ~ 16255119 (-)
G62421 LOC103138816,LOC103466733,LOC108251456 other upstream 1834636 16272451 ~ 16275573 (-)
AMCG00020336 NA other upstream 2178508 16616323 ~ 16624970 (-)

Expression


Co-expression Network