AMCG00020284


Basic Information

Item Value
gene id AMCG00020284
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 14439531 ~ 14440544 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020284
ATGAACGGCTCGTTTAGCTCTGATGGCAACGTTACTGAGCCCGGGGAGTGGGCTGCAGGCCGAACAGTGGCCTCTGTGATCCTGGGCCTGTCTTTCTTGGTTGGCACTCCAGGGAACCTGCTGGTGATCTGGACCATCCTGCGACATGTCCAGCCACGCTCCCACACCGTGCTGCTCATCCTCAACCTGGCAGTCGCTGACCTTCTGGTCCTCATCACACTGCCCCTGTGGATCTATTCCCTGGCGGATGCCTGGGTGTTCGGGGAAGCCGCCTGCAAAGCCATGGTCTATGTCATCTACGCCTGCATGTACAGCAGCGTGTTCCTCATCTCCACCATGAGCGTGGAGCGCTGTGTGGCCATCCTGTACCCCTTCGCCCTGCACGGCTGGAGGAAGGAGGGGGTGATGGCCAAGGTGCTGGTTGTCATTTTGGTCCTGGCCTTCATCTTCAGCATCCCTGTCATCCTCACACAAAGGGTGGATGTGACAGCAGGGAAAGAAGAATGCACGTACCGGAACTACACTTCGGACAGCCAGGAGATTTCTTGCCTGGTGCTCGAGACCTCGGTGGGCTTTATCTTTCCCTTCAGCATCCTGTTGGTGTGTTATAGCCAGGTGGGGAGGCGGCTGAAGCAGATGACCCTCAGGAACAAGCACAGATCCATAGCTCTAATCACCAGTGTGGTGGTGGCCTTCGCCGTGCTCTGGTTTCCTCATCACGTGCTCAATGTGCTCAGTGTGGTCTCGCTGCTGCTAGAGGATTCGGAGGCCCTGGATGATTTCCTGGGTAGTGCATTCTTCTTATCTGGGGCACTGGCCTTCATCAGTAGCTGCATCAACCCCCTGCTGTACTCCTTTGCTGCCCGCCGGTTTCAGAGCAGCTTGAAGGAGACCAAGCTGTCCCGGCTTTTCCAGGACATTGCCACCAACACCTCCCAGTTCAAGGGGACGGCCAGCAGCCTGACTTCAGAAAGGCAGAATGCTGCTGAACTCGCTCTTGAcactgtagtgtag

Function

GO:

id name namespace
GO:0007165 signal transduction biological_process
GO:0004871 obsolete signal transducer activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020284 True 1014 mRNA 0.57 1 14439531 14440544

Neighbor

gene id symbol gene type direction distance location
AMCG00020283 NA coding downstream 1716 14436796 ~ 14437815 (-)
AMCG00020282 NA coding downstream 12267 14405783 ~ 14427264 (-)
AMCG00020278 NA coding downstream 125530 14312412 ~ 14314001 (-)
AMCG00020274 atp6v0d1,LOC106588021,LOC103462946 coding downstream 189782 14241865 ~ 14249749 (-)
AMCG00020269 NA coding downstream 269890 14148574 ~ 14169641 (-)
AMCG00020285 slc12a4,LOC107696691,LOC107548948,LOC107563468,LOC107740471,LOC107657107 coding upstream 21869 14462413 ~ 14484977 (-)
AMCG00020288 slc6a2,LOC103378986 coding upstream 56690 14497234 ~ 14545943 (-)
AMCG00020287 NA coding upstream 114320 14554864 ~ 14564641 (-)
AMCG00020286 NA coding upstream 124230 14564774 ~ 14578838 (-)
AMCG00020289 irx6a,irx6,LOC107713056,LOC107755049 coding upstream 194022 14634566 ~ 14639369 (-)
G62066 NA non-coding downstream 38229 14345297 ~ 14401302 (-)
G61943 NA non-coding downstream 525365 13913172 ~ 13914166 (-)
G61927 NA non-coding downstream 615991 13821748 ~ 13823540 (-)
G61920 LOC107746475,LOC107567702,LOC107595988,LOC107697985 non-coding downstream 646600 13789391 ~ 13792931 (-)
G61872 NA non-coding downstream 688233 13751084 ~ 13751298 (-)
G62143 NA non-coding upstream 262967 14703511 ~ 14767563 (-)
G62191 NA non-coding upstream 591591 15032135 ~ 15034076 (-)
G62283 LOC107575789 non-coding upstream 982611 15423155 ~ 15423574 (-)
G62475 NA non-coding upstream 2039986 16480530 ~ 16480990 (-)
G62580 NA non-coding upstream 2228353 16668897 ~ 16669511 (-)
G62061 NA other downstream 107124 14330522 ~ 14332407 (-)
G62011 NA other downstream 307962 14129678 ~ 14131569 (-)
AMCG00020249 NA other downstream 604802 13824689 ~ 13834729 (-)
AMCG00020256 NA other downstream 626528 13811413 ~ 13813003 (-)
AMCG00020252 atp6v1g1,LOC107566902,LOC108259956 other downstream 631198 13805020 ~ 13808333 (-)
AMCG00020316 cnep1r1,tm188,LOC106587574,LOC107551481,LOC107554612 other upstream 1658356 16098900 ~ 16102739 (-)
G62409 NA other upstream 1678445 16118989 ~ 16120153 (-)
G62415 NA other upstream 1812244 16252788 ~ 16255119 (-)
G62421 LOC103138816,LOC103466733,LOC108251456 other upstream 1831907 16272451 ~ 16275573 (-)
AMCG00020336 NA other upstream 2175779 16616323 ~ 16624970 (-)

Expression


Co-expression Network