Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00020292 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030127.1 |
| NCBI id | CM030127.1 |
| chromosome length | 42978078 |
| location | 14989030 ~ 14990430 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0031018 | endocrine pancreas development | biological_process |
| GO:0007369 | gastrulation | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0043565 | sequence-specific DNA binding | molecular_function |
| GO:0003700 | DNA-binding transcription factor activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00020292 | True | 186 | mRNA | 0.66 | 2 | 14989030 | 14990430 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00020280 | NA | coding | upstream | 527729 | 14451775 ~ 14461301 (+) |
| AMCG00020279 | amfr,LOC107566269 | coding | upstream | 538379 | 14439078 ~ 14450651 (+) |
| AMCG00020276 | NA | coding | upstream | 605800 | 14339835 ~ 14383230 (+) |
| AMCG00020275 | dus2,LOC108229071,LOC106942792 | coding | upstream | 656621 | 14314392 ~ 14332409 (+) |
| AMCG00020277 | LOC102693979 | coding | upstream | 686031 | 14294733 ~ 14302999 (+) |
| AMCG00020291 | NA | coding | downstream | 278 | 14990708 ~ 14991451 (+) |
| AMCG00020298 | NA | coding | downstream | 170167 | 15160597 ~ 15165994 (+) |
| AMCG00020296 | NA | coding | downstream | 175584 | 15166014 ~ 15199292 (+) |
| AMCG00020295 | NA | coding | downstream | 221660 | 15212090 ~ 15218030 (+) |
| AMCG00020297 | aktip,LOC107713059 | coding | downstream | 245253 | 15235683 ~ 15244984 (+) |
| G62108 | NA | non-coding | upstream | 367330 | 14554856 ~ 14621700 (+) |
| G62118 | NA | non-coding | upstream | 410328 | 14577507 ~ 14578702 (+) |
| G62114 | NA | non-coding | upstream | 421592 | 14566719 ~ 14567438 (+) |
| G62062 | NA | non-coding | upstream | 587728 | 14345296 ~ 14401302 (+) |
| G62039 | NA | non-coding | upstream | 700196 | 14241865 ~ 14288834 (+) |
| G62185 | NA | non-coding | downstream | 41612 | 15032042 ~ 15034083 (+) |
| G62251 | chd9,LOC106562403 | non-coding | downstream | 307317 | 15297747 ~ 15298181 (+) |
| G62275 | NA | non-coding | downstream | 343254 | 15333684 ~ 15335056 (+) |
| G62282 | LOC107575789 | non-coding | downstream | 432777 | 15423207 ~ 15423573 (+) |
| G62368 | NA | non-coding | downstream | 1073665 | 16064095 ~ 16066816 (+) |
| AMCG00020281 | slc12a4 | other | upstream | 516485 | 14467800 ~ 14472545 (+) |
| AMCG00020273 | NA | other | upstream | 756762 | 14195784 ~ 14232268 (+) |
| AMCG00020267 | NA | other | upstream | 1037983 | 13948426 ~ 13951047 (+) |
| AMCG00020241 | cdc26,LOC107743800,LOC107691734,LOC107603191 | other | upstream | 1103914 | 13882825 ~ 13885116 (+) |
| AMCG00020255 | NA | other | upstream | 1116385 | 13863477 ~ 13872645 (+) |
| AMCG00020331 | st3gal2,LOC107686287,LOC106573711,LOC107672232 | other | downstream | 1592456 | 16582886 ~ 16604658 (+) |
| G62632 | NA | other | downstream | 1823944 | 16814374 ~ 16815857 (+) |
| AMCG00020370 | NA | other | downstream | 2443212 | 17433642 ~ 17442711 (+) |
| AMCG00020371 | nutf2 | other | downstream | 2468714 | 17459144 ~ 17471869 (+) |
| G62895 | NA | other | downstream | 2937898 | 17928328 ~ 17928904 (+) |
