AMCG00020295


Basic Information

Item Value
gene id AMCG00020295
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 15212090 ~ 15218030 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020295
AAAcaacagagggagagggagagggagagggagagggagagagagaatgaagggAACAGGCTGCCCTTGCTTTTTTCCATATGGCTTCCTAAATGGGATGTAAGAACCTTCTTGTGTCAGATTGTATCCAGTAACCGGCAGCCTGTTGTCCCAACAGTGATCCATGTGGATGTCGAAAACAACAAGGCAAGACGTGAGATCCTGAAGTCGGTGCTCCAGGGAGCCCAGCCAGAAATGGAGAGCATAAAGTTCACCGTGGTGAGTGAACCCCCCGAGAACGAGCAGGACGAGGACTGTGAGGACGTGGGCGTGGCTTTCCTGAGGATCCGGGATGTCCTGGAGGAGAAGCGGGACCTGGTGGACCGCAGCCTGGACATTGTGGACGTGCAGGGCCACGAGGTGATGGGGAGTCTGACAGTCACACTGGAGGCCTTGGACGCCATGCAGTCTGTCCTGAAGGAGCCCTGAGAGCCCAGTTGCAGCTCGTGCACACACAATCCTCAGAGCCAGAGTCTATTTTTATATCTGATgctaatttgtatatatatttatactcgttttgtaattaatgaaatatgtatgtgGGCCATTTTACACATGGCGCCTAATTGTGAGCCCAATGCACAATACAGAATGAAAAAACCTGTCACGATGTAAACAGATTTTCTTGCGTCAATGATGCGCTTCCTCCATTAGCAGCGATAGAATTCGAtacacattatttgtgtaatACGTCGTGTGAAAGTCagttaatttttaataaaatatttctttTCAAAGTGCCAGCTCAGGATTTAAGCCCCGCGAACACATTCTAAACTAAAGTGTGCTGTTATCCCTAATCACTGGACTAAATGAAAACCCTGCTAAGCCTCATTAGGAGTTTTACACTATGACGATTTTATTGGAAGTGGTAGATGAAAATTGCCTGGATTAATGTGTTAATCCACCTCTTTAAAATGCTAATGTCCATTTTATGCACATTAAATCTCAGTATGCATTTTCTTTGATGCGTGCAATTTCTATCAATTAAATACAGTGGAGAGAAACAGGCACAGCACAGATTAGTTCTCATGCTTCAAGCAtggatttcttattttttgcgGTTAAAATTCCCCCAGAATGGAGAGGGAAAAAATGCTAATATGAGATTCGGCGGCCTTCTACCAAATATGAGAAATCTGCAGCACTGTTTGTGCtaaaagcttttgaaatgtcTCTACAGTGTATGCACAAAGATACAAGCATTTGacctgtgaaaataaataaatattaacaggCTCTCTGTCACAGCGCACACCTAGCTTTCTCAAAGATGTGTGAGAAGTTAACTGAGGATGAATAagtatgaataaaatacatcactCATTTAATTCAGTATATCCGCGCTGCTGTCTTCACGCCAAACCAGCATTTCCCGGATTATCATTCTGAAAGGCTGTCCTGCTGCAGACTGTAATGAATGACTCCAAGGATGTaggttaaatattttaacagtaaaGCCGTCAGGGGTTCCAAGAAATTCTGCGATGtgatcttttttctttgttttttctttaaatagggcttttttttttctcaaattgtCAGCTCCAAAGAGACCAATTTCAAccaatctgtttattttttttatattattttaaagcagtg

Function

GO:

id name namespace
GO:0009880 embryonic pattern specification biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020295 True 1650 mRNA 0.42 3 15212090 15218030

Neighbor

gene id symbol gene type direction distance location
AMCG00020296 NA coding upstream 12798 15166014 ~ 15199292 (+)
AMCG00020298 NA coding upstream 46096 15160597 ~ 15165994 (+)
AMCG00020291 NA coding upstream 220639 14990708 ~ 14991451 (+)
AMCG00020292 NA coding upstream 221660 14989030 ~ 14990430 (+)
AMCG00020280 NA coding upstream 750789 14451775 ~ 14461301 (+)
AMCG00020297 aktip,LOC107713059 coding downstream 17653 15235683 ~ 15244984 (+)
AMCG00020299 NA coding downstream 26992 15245022 ~ 15247620 (+)
AMCG00020304 LOC106562398 coding downstream 224881 15442911 ~ 15496323 (+)
AMCG00020306 sall1,LOC106587587 coding downstream 542055 15760085 ~ 15770745 (+)
AMCG00020305 sall3,LOC106562315,LOC108274520 coding downstream 552985 15771015 ~ 15778141 (+)
G62185 NA non-coding upstream 178007 15032042 ~ 15034083 (+)
G62108 NA non-coding upstream 590390 14554856 ~ 14621700 (+)
G62118 NA non-coding upstream 633388 14577507 ~ 14578702 (+)
G62114 NA non-coding upstream 644652 14566719 ~ 14567438 (+)
G62062 NA non-coding upstream 810788 14345296 ~ 14401302 (+)
G62251 chd9,LOC106562403 non-coding downstream 79717 15297747 ~ 15298181 (+)
G62275 NA non-coding downstream 115654 15333684 ~ 15335056 (+)
G62282 LOC107575789 non-coding downstream 205177 15423207 ~ 15423573 (+)
G62368 NA non-coding downstream 846065 16064095 ~ 16066816 (+)
G62398 NA non-coding downstream 880956 16098986 ~ 16100810 (+)
AMCG00020281 slc12a4 other upstream 739545 14467800 ~ 14472545 (+)
AMCG00020273 NA other upstream 979822 14195784 ~ 14232268 (+)
AMCG00020267 NA other upstream 1261043 13948426 ~ 13951047 (+)
AMCG00020241 cdc26,LOC107743800,LOC107691734,LOC107603191 other upstream 1326974 13882825 ~ 13885116 (+)
AMCG00020255 NA other upstream 1339445 13863477 ~ 13872645 (+)
AMCG00020331 st3gal2,LOC107686287,LOC106573711,LOC107672232 other downstream 1364856 16582886 ~ 16604658 (+)
G62632 NA other downstream 1596344 16814374 ~ 16815857 (+)
AMCG00020370 NA other downstream 2215612 17433642 ~ 17442711 (+)
AMCG00020371 nutf2 other downstream 2241114 17459144 ~ 17471869 (+)
G62895 NA other downstream 2710298 17928328 ~ 17928904 (+)

Expression


Co-expression Network