Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00020299 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030127.1 |
| NCBI id | CM030127.1 |
| chromosome length | 42978078 |
| location | 15245022 ~ 15247620 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0006357 | regulation of transcription by RNA polymerase II | biological_process |
| GO:0051726 | regulation of cell cycle | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0005667 | transcription regulator complex | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00020299 | True | 432 | mRNA | 0.62 | 4 | 15245022 | 15247620 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00020297 | aktip,LOC107713059 | coding | upstream | 38 | 15235683 ~ 15244984 (+) |
| AMCG00020295 | NA | coding | upstream | 26992 | 15212090 ~ 15218030 (+) |
| AMCG00020296 | NA | coding | upstream | 45730 | 15166014 ~ 15199292 (+) |
| AMCG00020298 | NA | coding | upstream | 79028 | 15160597 ~ 15165994 (+) |
| AMCG00020291 | NA | coding | upstream | 253571 | 14990708 ~ 14991451 (+) |
| AMCG00020304 | LOC106562398 | coding | downstream | 195291 | 15442911 ~ 15496323 (+) |
| AMCG00020306 | sall1,LOC106587587 | coding | downstream | 512465 | 15760085 ~ 15770745 (+) |
| AMCG00020305 | sall3,LOC106562315,LOC108274520 | coding | downstream | 523395 | 15771015 ~ 15778141 (+) |
| AMCG00020307 | NA | coding | downstream | 654892 | 15902512 ~ 15908316 (+) |
| AMCG00020311 | NA | coding | downstream | 755810 | 16003430 ~ 16011619 (+) |
| G62185 | NA | non-coding | upstream | 210939 | 15032042 ~ 15034083 (+) |
| G62108 | NA | non-coding | upstream | 623322 | 14554856 ~ 14621700 (+) |
| G62118 | NA | non-coding | upstream | 666320 | 14577507 ~ 14578702 (+) |
| G62114 | NA | non-coding | upstream | 677584 | 14566719 ~ 14567438 (+) |
| G62062 | NA | non-coding | upstream | 843720 | 14345296 ~ 14401302 (+) |
| G62251 | chd9,LOC106562403 | non-coding | downstream | 50127 | 15297747 ~ 15298181 (+) |
| G62275 | NA | non-coding | downstream | 86064 | 15333684 ~ 15335056 (+) |
| G62282 | LOC107575789 | non-coding | downstream | 175587 | 15423207 ~ 15423573 (+) |
| G62368 | NA | non-coding | downstream | 816475 | 16064095 ~ 16066816 (+) |
| G62398 | NA | non-coding | downstream | 851366 | 16098986 ~ 16100810 (+) |
| AMCG00020281 | slc12a4 | other | upstream | 772477 | 14467800 ~ 14472545 (+) |
| AMCG00020273 | NA | other | upstream | 1012754 | 14195784 ~ 14232268 (+) |
| AMCG00020267 | NA | other | upstream | 1293975 | 13948426 ~ 13951047 (+) |
| AMCG00020241 | cdc26,LOC107743800,LOC107691734,LOC107603191 | other | upstream | 1359906 | 13882825 ~ 13885116 (+) |
| AMCG00020255 | NA | other | upstream | 1372377 | 13863477 ~ 13872645 (+) |
| AMCG00020331 | st3gal2,LOC107686287,LOC106573711,LOC107672232 | other | downstream | 1335266 | 16582886 ~ 16604658 (+) |
| G62632 | NA | other | downstream | 1566754 | 16814374 ~ 16815857 (+) |
| AMCG00020370 | NA | other | downstream | 2186022 | 17433642 ~ 17442711 (+) |
| AMCG00020371 | nutf2 | other | downstream | 2211524 | 17459144 ~ 17471869 (+) |
| G62895 | NA | other | downstream | 2680708 | 17928328 ~ 17928904 (+) |
