AMCG00020312


Basic Information

Item Value
gene id AMCG00020312
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 16012065 ~ 16036730 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020312
CTCAGGGCCGGTGCTGAAAGAGCTGCTCAGCTGAGCGTGGTGCTGCACGGAGCAGAGCGGCCGAACTGTGTGAGGAGTCCAGGATCCTGAAACGTGGCGGGAACCTTGACCACCCGTCTCCCAGCATTCCCTCCCCAGCCCTGCCCTCCCCTGCCTGCTGCTTCTGGGCTCAGTGATGTTGCTGAGGAGCACATAGTCACTGGCAGGAATGAACTGTGCCTGCCTGAGACCTGCCCTCTGAAATCTGCCTGAGACACGCAGAGAAAGCGAGAGACACGGGGAAAGCTGAGAGAGACAGCTGAGGCTGAAGAAGTGCTCAAGATGTGAAAGTGCCGGAGAAGTAAACAACCAAACAACAAGTGCACCTGAACCGCACCATACCTTCTGATAAGGgagaaaccaaaccaaaaaaacagccacataaaaacaaaaccggaTTCACTGCACTGGAattataactaatatatatctgtgtgtgtgtgtatgtatgcatgtatctTGATACATAAACACTGGTGTGCACCTGATTCTCACAAGTCCTACCCTGCCTGCTATGTTTCGCCCCGTGTGAGCCGAGCAGCACCATGCCAGCCAAGGGGAAGTACATGTTGAATGGCCAGGAGCAGGTGGGGCTATACAAGCAGTACTGTTACATCAGACAGTACcagctgctggtgctgctgttgGGCATCTCCATCCTGTCCTGCGTCGTGCTGCTCGTTCTCTTCTTCGCCTTACAGCTGAATGCCCTGGAACACCCTGCCTTCGTGGGCGTGGTGAGCTGCGGTCTGGCCCTGCTGGGGGCCGTGTTCGCCATGGTCTGCTGCACCGAGACGCTGTTCCAGAGGTGGATGAGGCTGCTGGCCGTGGCTGTCTGGGCCTGCCTCCTCATCATGGGCTTCGTCTTCACCCTGAGCGGAAGTGTCACCCGGGCTTGGGACCAGGTGCCCTTCTTCCTGTTCACCATCTTCACAGTGTACACTATGATGCCGTTCCAGATGCGAGACGCGGTGATTCTGAGTCTGGTGACATCGGTGTCCCACATCGTTGTGCTCAGCATCGTCCTCACCACCTCCTCAAAACCCCCCACCTTCCTCACCTACCAGcTGGTGTCTAATGGGGTCATCTTCCTGTGTGGGAATGTGGTGGGCGCCTTCCACAAGGTGCTGATGGCACGCGCCCTGCGTCAGACCTTCCTGGACACCCTGAGCTGCCTGGAGATCCGCATGAAGCTGGAGATCGAGAAGAGGCAGCAGGAGAACCTGCTCCAGTCAGTGCTGCCGGTGTACATCTCCATGGAGATGAAGCTGGCCATCATTGAGCGGCTGAAGGAGAGTAAAGACGCGCAGCAGCGGCTGGTCAAGGACAACAACTTCCACAGCCTGTATGTCAAGAGGCACGAGAACGTCAGCATCCTGTACGCCGACATCGTGGGCTTCACACGGCTGGCCAGCGACTGCTCACCCAAGGAGCTGGAGAATGAGTGCATGAGGATAAAGATTCTGGGGGACTGTTACTACTGTGTATCGGGCCTGCCGGTGTCCCTGCCCAGGCATGCCAGGAACTGTGTGAAGATGGGGCTGGACATGTGTGAGGCCATCAAACAGGTGCGGGAGGCCACAGGCGTGGACATCAACATGAGGGTGGGCGTGCATTCTGGCAACGTGCTATGCGGTGTCATCGGCCTGCGCAAGTGGCAATTTGATGTGTGGTCACATGACGTGACCTTAGCCAATCACATGGAATCAGGAGGGCTGCCGGGGCGTGTCCACATCACAGAGGCCACCCTGAAACACCTGAACAAGGCCTATGAGGTGGAGGAGGGCAACGGACATCTGCGGGATCCATACCTGAAGGAGCAGAACATCAACACGTACCTGGTGATCGACCCCCGGTCGAAGGAATCATCTGTGAGCAGCCAGCGGAAGACCAAGCAGTGCCGGCATAACGACGGGCTGAAGATGCGAGCGTCAGTGAGGATGACGCGGTACCTAGAGTCCTGGGGCGCCGCCAAGCCCTTCGCTCACCTGCAAAGCCGCGAGCTCTGCACCCCAACGGGAAACTGCGACCTGCACGCCAATGGGAAACTGCGCAAGGACATACCCTTGCGTTCACTCGTCTGTCCAAGGACAACAGACAGCCTGGATGAGTCCCTGGAGGagcccttctctctctccacctctccatTCGTCAGCTATAAGAACAGGTCTCAGAAGAGCAAGTTCGACGAGGAGCTTTACAATAAGATGGTCATGACCATCGATGGACTGAGCTCCAGCAAGCAGTGGATCAAATCAGAGGAAATGTTCAGCTTCACCTTGTGGTTCACTAAGAAGGAGCTGGAGAAGCAGTATCGCGCCATCGATCTTCCTGGCTTCAAGTACTACATCGGCTGTGCCAGCTTCATTTTCCTTTGTATCTTTGTGGTCCAGATGTGTCGGTTCTTCCCCGAGCGGCTGGCGTCCTGTCAGTGGCTGAGCACTGTGTCCGAGGCCGTGGGCAAGAAGCCATTTGTGCGCCTCCCTCTGGCCGTGGCCTCCACTGCCGTGATCCTGATTATTGCCGTCATCAATCTGTGCTTCTTCCCCTTCCCAGAGCTGTGCAATAACACTGCTGCCTTAACCAATGCCACAGAGTTTGAGGCATCCCATGGGCTCTTCTTCATGCCGTACGTTGTGTACTGCTGTCTCCTGGGCATTGTGGCCTGCGGGGTGTTTCTGCGAGTCAGCGTGGAGCTCAAACTCATCTTCCTGGTGCTGGCGTCCATTGGTTATTACATCATCATCCTACAAACCCACAGTAATCTCTTCGAATGCTATGGCTCTGTGCTGTACCCCAATGGAACCAGTGACACAATTCTGGAACAGTCCGGCCTCATGAAGCACCCAAAGGTGATGAGCTGTGTGTATATCTCGCTCTTCCTCATCACCATGGTGTTTCTAACCCAACAGACTGAATACTACTGTCGCCAGGACTTCCTGCTGAAGAACAAGAACCGCCAGGAGCAGGACAAGATCGAGACCATGGAGAACCTCAACCGGCTGCTGTTGGAGAATGTGCTGCCCGCCCATGTCGCCTCCCTCTTCGTAGGAGAGAATAAAAAGAACGAGGTGGGATTCCTCAAAAACAGTTTACTTACTGAAAAGTATAAGGACCTGTACTACAAGTCGTACGACTGTGTGTGCGTGATGTTCGCCTCGGTGCCTGACTTCAAGGAGTTCTACACGGAGTGCGACATCAACAAGGAGGGCCTGGAGTGCCTGAGGCTGCTGAACGAGATCATCGCCGACTTTGACGAGCTCCTGTCGAAGCCTAAATTCAGCGGGGTGGAGAAAATCAAAACCATCGGCAGCACGTACATGGCAGCAGCAGGGCTCAGCGTTACCGCCGGGCAGGACAACAACCAGCCGGCGCAGGACCGCGAGAGGCAGCACACGCAGATCGGGAACATGGTGGAGTTTGCCATTGCCCTGGTGGGGAAGCTGGACGGCATCAACCGCCATTCCTTCAACAGCTTCCGGCTACGTGTGGGAATCAACTACGGCCCAGTGATCGCAGGGGTGATCGGAGCCAGGAAACCACAGTACGACATCTGGGGGAACACGGTCAATGTGTCCAGCCGAATGGAGAGCACTGGAGAGCTGGGCAAAATCCAGgtgaCGGAGGAGACGTCCAACGTGCTGCAGAAGCTGGGCTACTCCTGCGAGTGCCGGGGGATGATCAAGGTGAAGGGGAAGGGCGAGCTCAGGACGTTCTTTGTGTGCACGGACATGAGTAAGTCCCAGGGCATCGCTCTGAGCTGAGAGCGTGGGTCACTCGCTCCCACTGCCACTGCCTCACCCCAGACACTTGAAGAAACAACCTACacttttattcagatttttttttttttacttaaattaaattaccatATACCTAGTATTATTAATAAGGTTCctctcattaaaatgtttttttttttggtggctgggggaggggggataaaaaaaaaaagtcacctgTCGAAGGAGCAGATGATGATGGAGATGAAGTACCGCCCCACAGAAAAAGGTTAAGATTtctactgttttttatttttattttattttattctcctcTGCGCTGCATTGAAGAATCCAGCACTACCATTTACAAGAAGGTGGGGAATTGACTGAAATATTAGAAACTGCAGCAGACTCAGTATTTGCCTAGAGTGACAACTTAGTTTTATTTAGCTATTcgattgcattttattttaattgtaaattcttgtcttgtatatattttggaGCTGCTGTTTTGCACTTACTTGAAGAATAAAGGAGCGTTTCagacaggtttttatttatgttcacaGGTCAAACATTTCCTTgtctctgtattttgttttgttttgttctttttgttcttaAAGCAAGTTGTTGTTTAGTGTGATACAAACGCCTAATTCCCAGATCTGGAAGCCAAATAATCTGAATGCTGAACGGCCCGCTTCGATTATGATGCGCACTCTGTGTAATTACTGTGTAATGTGTTGTTTAGTCGTGTTTCgtaaaaaaaaggtttcattATCTGAAACCAAGGCTCTTATTTTCAGTCACCTGCAAAATTCTCACTGATAATGCCGTGCTTTTTCCCCAAAAACTAAATCCATAACCAAACGGAGGAATGAACACTGCCACCGTGTGGATGCCAACACACACCTTAGCTGTACAATCAATATGAAtagagaaagcaaaacaaaaacaaaaattcagCTAAAAgttgtgatttttgtatttacagtttacagataTGGGGGTGGGTGGTAGGGTTTTGTGATAAAAACGTCATGATGATTCCTGATCTCTGTAACCGAACGGAAAGCTACCAGTCCAGAGCCAACTAAAGGAAAGCctcattcagtcagtgtgtgtgcgttcGCTGTTGTACGTACTTGCGTCTATAGGTCAATGTGAGTGTGTGCCATTTACATCCTATTTTGCCATTTCCGCCACACAAAGGATATTATTTAGCTTTCATTTCCTGCATGTTTTGATACAATACCTACTGAAGCAGCAGGGTGAAATatagaatgttttttattttacaaagtttATAAGGAAACTGAGTAGGAGCCTCAAAGTGCTGATGACATTTGTAATCAGACTGCCTCTGGTAAACTTGATTCTTTATGTGCCTCAAACATATTATGAATGAAGAACTGCTgttattattgaaatacaaatgagTGATAAGCCTCCATTCCTCTccctcttgtttttttattgtttatttaaaactgttgCTGCCCGTTTACTCTGTATGCAGGTATCATTCAAAGAGGAACaaatgcaagtgtgtgtgtgttttgcattttttttttgtacagtccacaataaacaattttcaaaacat

Function

GO: NA

KEGG:

id description
K08042 ADCY2; adenylate cyclase 2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020312 True 5376 mRNA 0.50 25 16012065 16036730

Neighbor

gene id symbol gene type direction distance location
AMCG00020309 NA coding downstream 78387 15922293 ~ 15933678 (-)
AMCG00020308 NA coding downstream 110491 15893227 ~ 15901574 (-)
AMCG00020310 NA coding downstream 120017 15868506 ~ 15892048 (-)
AMCG00020303 NA coding downstream 691789 15308859 ~ 15320276 (-)
AMCG00020301 chd9 coding downstream 704569 15270793 ~ 15307496 (-)
AMCG00020313 papd5 coding upstream 30683 16067413 ~ 16078705 (-)
AMCG00020317 NA coding upstream 52226 16088956 ~ 16097553 (-)
AMCG00020323 LOC107577405,LOC104961177 coding upstream 420849 16457579 ~ 16469287 (-)
AMCG00020325 lonp2 coding upstream 435854 16472584 ~ 16473662 (-)
AMCG00020324 NA coding upstream 437543 16474273 ~ 16479633 (-)
G62283 LOC107575789 non-coding downstream 588491 15423155 ~ 15423574 (-)
G62191 NA non-coding downstream 977989 15032135 ~ 15034076 (-)
G62143 NA non-coding downstream 1244502 14703511 ~ 14767563 (-)
G62066 NA non-coding downstream 1610763 14345297 ~ 14401302 (-)
G61943 NA non-coding downstream 2097899 13913172 ~ 13914166 (-)
G62475 NA non-coding upstream 443800 16480530 ~ 16480990 (-)
G62580 NA non-coding upstream 632167 16668897 ~ 16669511 (-)
G62582 NA non-coding upstream 643126 16679856 ~ 16680624 (-)
G62655 gnao1a,gnao1,LOC108264367,LOC108249535,LOC106925363,LOC103367675 non-coding upstream 860140 16896870 ~ 16923733 (-)
G62659 NA non-coding upstream 950589 16987319 ~ 16989284 (-)
G62061 NA other downstream 1679658 14330522 ~ 14332407 (-)
G62011 NA other downstream 1880496 14129678 ~ 14131569 (-)
AMCG00020249 NA other downstream 2177336 13824689 ~ 13834729 (-)
AMCG00020256 NA other downstream 2199062 13811413 ~ 13813003 (-)
AMCG00020252 atp6v1g1,LOC107566902,LOC108259956 other downstream 2203732 13805020 ~ 13808333 (-)
AMCG00020316 cnep1r1,tm188,LOC106587574,LOC107551481,LOC107554612 other upstream 62170 16098900 ~ 16102739 (-)
G62409 NA other upstream 82259 16118989 ~ 16120153 (-)
G62415 NA other upstream 216058 16252788 ~ 16255119 (-)
G62421 LOC103138816,LOC103466733,LOC108251456 other upstream 235721 16272451 ~ 16275573 (-)
AMCG00020336 NA other upstream 579593 16616323 ~ 16624970 (-)

Expression


Co-expression Network