AMCG00020315


Basic Information

Item Value
gene id AMCG00020315
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 16104368 ~ 16112905 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020315
CTCAACCCGTCCTGCATCGGCTGCTCTTAGCGGGTTTGTTTCTCTCTGGTTTTGAATGGCAGGTCTCCACCATGTCTTCGTGGGTGAAGGTTACCCGAGGACGCATGCCCAAAACATTAGCGAACGGGGGAAACCGGAGTGGACCAGGAAAGATCCCCTTCCTGCTGAACAGCATCAAGCCCTACAGACCATTCAGACGCAACCCCTACCCAATGCGGGAGGACAGGAAGGACGGCTACAACGAGGAGTACGAAGACGCGCAGAGCTTTGAAGAATTGCTGGACCAGCAGCATGACTACTCCCCTGGCAATGAGGACCACTATGAAAGATATCAGTATTCACAGAAGGCGGGATCCAAGAGCTACTCCCAGGCGGACAGGCGGAGCTCCTTGTACCAGCGGTTCTTCAAGCAGATCCAGGAGGAGTACGACGAGCAGCGCCCCGCGGACTGCGTGGTCCTGTCCGTGACGGAGCGGCAGACGGATTATGCAAAATCGATAGGCCACTGTTTGCAAGACCGCGGCCTTGTGGTGGAAATGATTTACCTGCACTCGGAATCGGGGCTCACCCGCGCCCTGCAGGACGTCCGCTCTGACGGGTCCCCCTTATGTATTCTCGTGGAGCAGTCAAACGTAGCGCTCTCCTCTTGCACCGTAATCATATTTTACGAGTCTCTCAAAATTCACCGTAACATGCCGTCGGAGCGCGCCATGGAGTTTGTGACGGGGGAGTACGGGCGTGTGCGCTCGGAGCGCCAGGAGAAGGAGCGGGAGGAGATCGCGCTGAAGGCGGCCGACCTTGCCGACGACTacctggagagggagaagagcgAGAAGCACAGTGTCCCCCTCGGCACTCGCcacctgctcctgctgctgggGGAGGGCAAGCACCTGTCCCCCGAGGAGCTGGGCACCGTGGCCGACTACGTCCGCACCAGGCAGGAGGAGCAAGCGAAGTCGAGACTGTCCTGTAACGGTGCTGCTGGTGTCTGCCGCTCTGTGGGGTCTTCTAACGAGACTGACAATGGCTCCTACCCCGGGATGAGGAACCTGCTGCCCAGCGGCCTGAGCAAGCCACCCCCTCTGCTGCCCACCCCCAGCTGCCCGCCACTGCTGGACCCCCCTGGAAACCCCCAGGGCAAGCAGGCACCTCTCCTCCCCACGCCAGGTCCGCACCCCAAAACCAAGCCCCCGCCGCTGCTGTCCATGCACGGGCACCAGGGCCCCCCCCACGgcctcccaccccccccaaagCGCCTGCTAATGGGAGAGAAGCCAGGTCTGCTCCCGACGCCAGTTTCACCTAGATATGCCTCCTGCGAGCCCCCTGCCCCCGCCAGCCCAGCCCTGATGCTCGGTGCActgtttACCTTGCTGGTGTTTGATCTCATGGCTTTGTCTGCAGCTGTGAAGAATTCATCAAGTTGGAGAGTAATGAAGGACTGTTTCCGCTTCATTTACAGAGCTGTGAAAGACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020315 True 1481 mRNA 0.60 11 16104368 16112905

Neighbor

gene id symbol gene type direction distance location
AMCG00020311 NA coding upstream 92749 16003430 ~ 16011619 (+)
AMCG00020307 NA coding upstream 196052 15902512 ~ 15908316 (+)
AMCG00020305 sall3,LOC106562315,LOC108274520 coding upstream 326227 15771015 ~ 15778141 (+)
AMCG00020306 sall1,LOC106587587 coding upstream 333623 15760085 ~ 15770745 (+)
AMCG00020304 LOC106562398 coding upstream 608045 15442911 ~ 15496323 (+)
AMCG00020318 NA coding downstream 36415 16149320 ~ 16154632 (+)
AMCG00020314 znf423,si:ch211-216l23.1,LOC107738741 coding downstream 64703 16177608 ~ 16180913 (+)
AMCG00020319 si:ch211-216l23.1,znf423,LOC106533351,LOC107740334 coding downstream 119676 16232581 ~ 16236548 (+)
AMCG00020320 LOC106560866,LOC107738740,LOC107686280,LOC107549643 coding downstream 141588 16254493 ~ 16274574 (+)
AMCG00020321 cbln1,LOC106921425,LOC107090910,LOC106573707,LOC108250943 coding downstream 180589 16293494 ~ 16299985 (+)
G62398 NA non-coding upstream 3558 16098986 ~ 16100810 (+)
G62368 NA non-coding upstream 37552 16064095 ~ 16066816 (+)
G62282 LOC107575789 non-coding upstream 680795 15423207 ~ 15423573 (+)
G62275 NA non-coding upstream 769312 15333684 ~ 15335056 (+)
G62251 chd9,LOC106562403 non-coding upstream 806187 15297747 ~ 15298181 (+)
G62432 NA non-coding downstream 302573 16415478 ~ 16488182 (+)
G62480 NA non-coding downstream 388879 16501784 ~ 16504823 (+)
G62494 NA non-coding downstream 420451 16533356 ~ 16535401 (+)
G62504 NA non-coding downstream 434831 16547736 ~ 16565189 (+)
G62564 NA non-coding downstream 532033 16644938 ~ 16646261 (+)
AMCG00020281 slc12a4 other upstream 1631823 14467800 ~ 14472545 (+)
AMCG00020273 NA other upstream 1872100 14195784 ~ 14232268 (+)
AMCG00020267 NA other upstream 2153321 13948426 ~ 13951047 (+)
AMCG00020241 cdc26,LOC107743800,LOC107691734,LOC107603191 other upstream 2219252 13882825 ~ 13885116 (+)
AMCG00020255 NA other upstream 2231723 13863477 ~ 13872645 (+)
AMCG00020331 st3gal2,LOC107686287,LOC106573711,LOC107672232 other downstream 469981 16582886 ~ 16604658 (+)
G62632 NA other downstream 701469 16814374 ~ 16815857 (+)
AMCG00020370 NA other downstream 1320737 17433642 ~ 17442711 (+)
AMCG00020371 nutf2 other downstream 1346239 17459144 ~ 17471869 (+)
G62895 NA other downstream 1815423 17928328 ~ 17928904 (+)

Expression


Co-expression Network