AMCG00020318


Basic Information

Item Value
gene id AMCG00020318
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 16149320 ~ 16154632 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020318
ATGGAGGCAGTGGAGGACCTGGAAATCCCTGCCTTGTCTAGGTTCTTGCCACCTGGCACATCCCACGCGCAGGGCCTCGGGGTGCACTGTTCCCCCCCTCCTTGGGCCGTTCCACTTGGCACAGACTGTGGGGTGGGGAATACGCTCCTGTTCAATCTCAACGAGCAAACACCCGGAAAGGAGCTGGCCTGCGCCGCGGGGGGCTGGGTTCCAGCTCTGGCCTTGGGAGCAGAGCATTTAACATATGCGGTGGCAGgtgagcaggagcaggagcgcAAGGACAGACGGGTGCTGGAGGACGGGCACAGTGTGACGAGCCACGAGGACCGAGCAGGTGACGACGACCTGGACGACGAGGCCCTTTACACCTGCGACAACTGCCAACAGGACTTCGAGTGCCTGGCGGAGCTGACTGAGCACCGCACACACCTCTGCCCTGCTGGTAAGCCTCTCCCTTTCCCCTCACGCCATCAGCACACACCGGTCACTCCGCCGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020318 True 498 mRNA 0.63 4 16149320 16154632

Neighbor

gene id symbol gene type direction distance location
AMCG00020315 NA coding upstream 36415 16104368 ~ 16112905 (+)
AMCG00020311 NA coding upstream 137701 16003430 ~ 16011619 (+)
AMCG00020307 NA coding upstream 241004 15902512 ~ 15908316 (+)
AMCG00020305 sall3,LOC106562315,LOC108274520 coding upstream 371179 15771015 ~ 15778141 (+)
AMCG00020306 sall1,LOC106587587 coding upstream 378575 15760085 ~ 15770745 (+)
AMCG00020314 znf423,si:ch211-216l23.1,LOC107738741 coding downstream 22976 16177608 ~ 16180913 (+)
AMCG00020319 si:ch211-216l23.1,znf423,LOC106533351,LOC107740334 coding downstream 77949 16232581 ~ 16236548 (+)
AMCG00020320 LOC106560866,LOC107738740,LOC107686280,LOC107549643 coding downstream 99861 16254493 ~ 16274574 (+)
AMCG00020321 cbln1,LOC106921425,LOC107090910,LOC106573707,LOC108250943 coding downstream 138862 16293494 ~ 16299985 (+)
AMCG00020322 NA coding downstream 265691 16420323 ~ 16434057 (+)
G62398 NA non-coding upstream 48510 16098986 ~ 16100810 (+)
G62368 NA non-coding upstream 82504 16064095 ~ 16066816 (+)
G62282 LOC107575789 non-coding upstream 725747 15423207 ~ 15423573 (+)
G62275 NA non-coding upstream 814264 15333684 ~ 15335056 (+)
G62251 chd9,LOC106562403 non-coding upstream 851139 15297747 ~ 15298181 (+)
G62432 NA non-coding downstream 260846 16415478 ~ 16488182 (+)
G62480 NA non-coding downstream 347152 16501784 ~ 16504823 (+)
G62494 NA non-coding downstream 378724 16533356 ~ 16535401 (+)
G62504 NA non-coding downstream 393104 16547736 ~ 16565189 (+)
G62564 NA non-coding downstream 490306 16644938 ~ 16646261 (+)
AMCG00020281 slc12a4 other upstream 1676775 14467800 ~ 14472545 (+)
AMCG00020273 NA other upstream 1917052 14195784 ~ 14232268 (+)
AMCG00020267 NA other upstream 2198273 13948426 ~ 13951047 (+)
AMCG00020241 cdc26,LOC107743800,LOC107691734,LOC107603191 other upstream 2264204 13882825 ~ 13885116 (+)
AMCG00020255 NA other upstream 2276675 13863477 ~ 13872645 (+)
AMCG00020331 st3gal2,LOC107686287,LOC106573711,LOC107672232 other downstream 428254 16582886 ~ 16604658 (+)
G62632 NA other downstream 659742 16814374 ~ 16815857 (+)
AMCG00020370 NA other downstream 1279010 17433642 ~ 17442711 (+)
AMCG00020371 nutf2 other downstream 1304512 17459144 ~ 17471869 (+)
G62895 NA other downstream 1773696 17928328 ~ 17928904 (+)

Expression


Co-expression Network