AMCG00020329


Basic Information

Item Value
gene id AMCG00020329
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 16558542 ~ 16569600 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020329
CGGGAAAGTGGTAGAAGTGCGTATTGCTGCTTCTCAGGCTGTCAGAGTGACTTGCCCTGAGGACAGGAGGGCTCGGCGTGCATGGGTTTACTGCTACCCTGAGTGTGTTAGAGTAcgaatgtgtgtgagagagagtacgtatcgctgtgtgtgtgtgtgagtccaGGATGCAGCGGCCAGCCGGGGTGCAGTGGACAGTGGTGGCCCTGACCTGCCAGCACCGGGACAGCGAGTATGCCTTCCAGCGCGAGCTGGAGTGCCGTCAGCGGCGGGGCCTGATCCCCCAAGGGGCTCTGCTGCTCACTGTGTCAGACCCGCAGGACCGGCTGGGCAGCGGGGGGGCCACTCTCAACGCCCTCCTGGTGGCGGCAGAGCACCTCAGCGCCCAGGCCGGGCACACGGTGGTGACGGCTGACGTGCTGGAGAACGCACACGTCCTCATCCTGCACATGGGGCGGGACTTCCCCTTCGATGGCTGCGGCCGAGGGTTCTGCTGGCTGCCGGCGGGGACGGCGGACctgggggaggtggaggggccCCTGTGCAGCCTGGACCTGCTGCTGTCCTGCCTCACACACCAGATTGCCCCTGGCTCCCCCCCTGGCGTGTGGGTGAGCGGTACAGACATGCTCCTGCACATCCGTACATCCCCCGACATTTCCTGGGATGGCTTCTCTGGGGTGAGAGTTTTCTCCCTGCCTGGTGACGTCAGTTATGCCAGGAACCATGGGGTCTACCTCACTGACAAGCAGGGCACAGTGCGTGACATCATCTACAAGGGCCCTGCCGACAAGATCCAGGCCTGTGCTTGGCCTGATGGGAGAGTCCCTCTGgtgtcaGGGCCGGTGTTTTTCTCAAGGGAAGTGGCAGAGCGTCTCTTGCACACCCACGTCACCCCACCCCTGGACGCCTGCACGTACCTGGGCCTGGACTCTGGGACGCCCGCAGTACAGctgTCTCTGTTCCTGGACATATTGCTGTGCCTGGCAGGAGATGTGTGTGAGGAGGACTTTGTGAGTGGCAACAGGCAGGGCAGCAGCTGCAGCCAGGGGCAGCAAGGGGCAGCGCTGAGGAACGCCCGCACCGtgctgtggagggagctgaggGGGATGGAGCTGACCCTGGCGTATGTTCCAGACGGTTGCTATGACTACATGACCCTGTCTGGGGACGAGCACATCGGCCGTTTGACGGAGAGAGCGCTGGGGGGCAGAGAGAcgctgtcacacactgagAACCCCCAGTTGCTAAGCGATGGCTGCTGTGTGATCAACAGCATTCTAGAAGGAAAGGTCAGCGTGGGGTCACAGGCTGTAGTGCAGCACTGCCACCTACAGGGCCCTCTGGTGATCCAATCAGGATGCCTCCTATCTGGGATTGACCTGACCTCATCAGCCCCCTCGCTGCAGCACGCCCCCCTCTCTGACATCATCATCCAGGGACACCACGTCCAGCTAGGGGACATGCGGCTCAGGGTGTTCACCGTCCTGGGACGCCATGACAACCTGGAGGCTTCTCCTGCCGACCGGAACGCCACATTCCTGAACCACGGCTGGGCGGAGTTCTCCAGGAGGACCGGGATACAGGCTGGAGAGCTGTGGGGTGAGGAGGGTGGCAGTGCTCCCCGCTCTCTCCTGGATGCCCGGTTGTTCCCAGTCTTCCAGCCCGGGGGGGCAGTGGGGCTGGGCGGGGTGCTGTGGCTGCTGGGGGCGGCTGGGGGTACCTGGGGGGGTGTGGAGCAGTGGAGGGCTGCCTGGCGCCTCTCTCTGCGGGATATCCTGTGCTATACTGACCAGCAGGGGGAGCTGGGCTGGCGCAGGGAGCTGTTCTTTGGCGGGGCGAGGAGGAGGGCGAAGGACACACTGCTGGGCCGGCGGGACCAGAGCCTCTTGCCGCTTGTCAGGGCTGCGGTACAGGGCGGCCAGCAGGGGGTGCTGCTGAGCACGCTGGATAGCGTGGCAGCTGACTGTGAGGACCCCGGTGTAGCTGCCCGCACTCTTGCCTGTGTAGCCGACGTGTTGGGCTGCATGGCTGGGGGGGAGGGTGGGCTGCGCGGGGGGCCAGCTGCCAACCCTGCCTGGAGCCCCGCCTTCGCCCTGCTGGAGAAGAAGGATCTCCCAGGGGGGGTCCGGGAACTCGCACTGCAGAGAAAGAACTGGCTCAGCAGGCCACACCTGCTGGTCCGGGCCGCCCGTCACTACGAGGGGGCGGGGCAGATCCTCATCCGTCAGGCTGTGATGTCAGCTCAACGCTTCATCACCCCTGGTCGAGGGGAGGCCCCGCCTGTTGGCGCATGGGTGGAGGTGGACTGTCCAGCCAGGATGGACCTGTCAGGTGGCTGGAGTGACACCCCGCCCATCACTTTCGAGCGGGGGGGTGCAGTGGTGAATGTGGCAGTGCGAGTGGACGGCCGGCGGCCCATTGGAGCCCGCGCCCGCCGTATCAGGGAGCCTCGCCTGCTATTGGTCAGCTCTAGCGGGGGGCGGGACTGCCAGTTCACCACAGAGACGGTGTGCGAGACGCTGGAGGACCTGCAGGACTACTACCAGCCACACGCTCCAGGTGCCCTGCTGAAAGCGGCCTGTATCTGCAGTGGCCTGGTGATCTGCccttcccagcagcccctggGGCAGCAGCTGATGGAGCGCTGTGGCGGGGGGCTGGAGGTCCACAGCTGGTCTGACCTGCCACACGGCTCAGGATTGGGGGGGGGCTGGCAGGACCAGGTGGGGgggctggtggggggggtgaagCTGGGCCGGTCGGCAGCAGCCCTGCCCCTCAGAGTGGAGGTGGAGCCCCTGGCCCTGCCCGACGGCTTCATTCACACCCTGAACCAGCACCTGCTGCTACTCTACACGGGCAAGACTCGGCTCGCTCGCAACCTCCTGCAGGACGTGGTGCGTAGCTGGTACTCCAGGCTGCCCTCCATGGTGGAGAACACTGAGGGGCTGGTGAGCAATGCACAGGACTGTGCCCAGGCCTGCAGAGAGGGCTCTCTGGAGCGGCTGGGTGCCTGTCTGGACCGGTACTGGCAGCAGAAGCGGGCGATGGCGCGGGGGTGTGAGCCGGCGGCCGTGCGCGCCATGATGGCAGCTCTGCGACCTCTGACGCTGGGGCAGACCCtggcgggggcggggggcggTGGATTCCTGTGCCTCCTCACCCGGGAGCCACGGCAGCAGGACAGGGTGCAGGCCGTGCTCTCCGCCACACAGgggCTGGGGGACTTCTCCGTCCACACTGTGGAAGTGGACACACAGGGGATCTCAGTCCGACACTCTAGCAGCAGCTCAGACTGA

Function

GO: NA

KEGG:

id description
K05305 FUK; fucokinase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020329 True 3302 mRNA 0.66 23 16558542 16569600

Neighbor

gene id symbol gene type direction distance location
AMCG00020328 sf3b3 coding downstream 9994 16534696 ~ 16548548 (-)
AMCG00020324 NA coding downstream 78909 16474273 ~ 16479633 (-)
AMCG00020325 lonp2 coding downstream 84880 16472584 ~ 16473662 (-)
AMCG00020323 LOC107577405,LOC104961177 coding downstream 89255 16457579 ~ 16469287 (-)
AMCG00020317 NA coding downstream 460989 16088956 ~ 16097553 (-)
AMCG00020337 NA coding upstream 36016 16605616 ~ 16614656 (-)
AMCG00020333 NA coding upstream 55638 16625238 ~ 16631859 (-)
AMCG00020335 LOC107576748 coding upstream 71404 16641004 ~ 16644491 (-)
AMCG00020334 rspry1,LOC106560854 coding upstream 77662 16647262 ~ 16663094 (-)
AMCG00020340 NA coding upstream 114284 16683884 ~ 16714207 (-)
G62475 NA non-coding downstream 77552 16480530 ~ 16480990 (-)
G62283 LOC107575789 non-coding downstream 1134968 15423155 ~ 15423574 (-)
G62191 NA non-coding downstream 1524466 15032135 ~ 15034076 (-)
G62143 NA non-coding downstream 1790979 14703511 ~ 14767563 (-)
G62066 NA non-coding downstream 2157240 14345297 ~ 14401302 (-)
G62580 NA non-coding upstream 99297 16668897 ~ 16669511 (-)
G62582 NA non-coding upstream 110256 16679856 ~ 16680624 (-)
G62655 gnao1a,gnao1,LOC108264367,LOC108249535,LOC106925363,LOC103367675 non-coding upstream 327270 16896870 ~ 16923733 (-)
G62659 NA non-coding upstream 417719 16987319 ~ 16989284 (-)
G62660 NA non-coding upstream 420667 16990267 ~ 16990714 (-)
G62421 LOC103138816,LOC103466733,LOC108251456 other downstream 282969 16272451 ~ 16275573 (-)
G62415 NA other downstream 303423 16252788 ~ 16255119 (-)
G62409 NA other downstream 438389 16118989 ~ 16120153 (-)
AMCG00020316 cnep1r1,tm188,LOC106587574,LOC107551481,LOC107554612 other downstream 455803 16098900 ~ 16102739 (-)
G62061 NA other downstream 2226135 14330522 ~ 14332407 (-)
AMCG00020336 NA other upstream 46723 16616323 ~ 16624970 (-)
G62618 NA other upstream 223266 16792866 ~ 16793167 (-)
AMCG00020346 nup93,LOC103368977 other upstream 225396 16794996 ~ 16817767 (-)
G62853 necab2 other upstream 1041064 17610664 ~ 17626189 (-)
AMCG00020403 NA other upstream 1417581 17987181 ~ 18015862 (-)

Expression


Co-expression Network