AMCG00020330


Basic Information

Item Value
gene id AMCG00020330
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 16634102 ~ 16640976 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020330
GTTTAACCCAGGTGAACGCCCCAAACAGCCTGGTGGCAGAGCAGTGTGCTGTGAAAGCAAGCCCAGAGCAGGGAGTGTCATCAGAGCCACCCAGTCAGGGACCCTGCggagcacactgcacacaggcaGTGTGTGAATATCGATTTTAAGCAGAGGATTTGTGTTGTAGTTTTTTAGTAGTTTTGGTCTGGACAGGCTGCTTGGTtgctggttatttatttatttattttgccatggCTGAGTTCCCAGCCAAAGTGAGCACGGTGACCAGCTCCCAGCCACACACAACTGGCCAGAGCTTCACTTCCAGGTTCCTCTCTGTGGACCTGGTCTTCATCAGGACTATCCCCGCCATCCTCATGATCTTCGAAATCGCTCTGGGTCTGCTGGTGTGGGCGCTCATCGCCAGTACACACTATTACAAGATCCCTGCGTTCGGCTGGGTGATGTTTGTCAGCGTCGTCCTCTGGATCCTCACCATCATACTGTTCCTCCTCTACTTCCTCGGAGTCAACAGGAAGCTGGCCATCGTGCCCTGGACCATTACGACTCTGGCATTTAACATCAGCGCGGCTATCCTGTACATCACGGCCTTCTTGGCCAACGCAGCGTCCATCACTCCATACTTCAGAGCCGGCTCCCTGGACTTCAACAACCTGGCCGCTGCAGCGTTCTTCGCCTGCCTGGTGATGATTGCCTACTGCGCCAGCTCCTTCTTCGGCTTCATGGCATGGAGAGGGGAGGGCAGCAACGCGGCCACGAGCCAGGCCGATGGGAGCAGGCCAGCCTAGACACTGCCCTCAGGATACAGCCCTGTTTACACTCACCCGACAATCAATGGTGGGAGCAAAAGATTATATACACTAGTTTATATTTTGAATCTGTAAGAAAGCAGTCGAGAGAAAGTCCAGATTGTGAGGCAGATCCTCACTGGCCTGGTCTGAATGGACTGATACCAGCgccaccactgaactctctcTATGCTGTGTCTGAAGAACACTGAGCAACATTAACACCAAAACTTAAAGCCTATTAATCTTGAACTCTCTCGTCACAGACTCCATCACAAAAACGCAAGAGACCACACTGCAATAGCACCGAAATATCCCACATTATCCCATGCTCTTTGCGTCTGTCCACAGGCGCCCAGACTTCTCTAACTTTCCTCTACAGGCTGCATCCGTTGGATCCCCAGTTTTGCGAGTGGTTGAACTTTCTCTGCTGCTGTAATCTTAGGCCTTACGGAGGTCAGAGAGAGTCGGCCAATCTTCGGGCTCACTGCACGTCTACTCAGCCTACAATCGCAGGCCGCTGAATCACTAGATTTACTATAGTGAAGACCAGCCTAAATAAATTGGGTGACGTGGCAGGAATGTGGACAGTCACCTCCCGGGGCCGCAGCCCACTCCTCTCCTCAGGCGAGAGGTCAATCATTAACCGGCTAACACAGGGTCACCTTCTGGGCAGGAGCCCGTGTGGAGGAGCGTGATGTCCAACCAAGTCAACACACATGTCcagttagtgtttgttttttaaatgaagactaCTGATGAATAAACTGTGTATTCTGCTATAAATGTTACCTGTATTTATAAACCACAAGTGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020330 True 1607 mRNA 0.51 4 16634102 16640976

Neighbor

gene id symbol gene type direction distance location
AMCG00020338 NA coding upstream 16859 16616416 ~ 16617243 (+)
AMCG00020327 cog4,LOC107577202 coding upstream 76645 16550086 ~ 16557457 (+)
AMCG00020326 siah1,LOC106573709 coding upstream 181467 16450836 ~ 16452635 (+)
AMCG00020322 NA coding upstream 200045 16420323 ~ 16434057 (+)
AMCG00020321 cbln1,LOC106921425,LOC107090910,LOC106573707,LOC108250943 coding upstream 334117 16293494 ~ 16299985 (+)
AMCG00020332 NA coding downstream 25166 16666142 ~ 16680624 (+)
AMCG00020341 bbs2 coding downstream 176607 16817583 ~ 16825446 (+)
AMCG00020349 NA coding downstream 186143 16827119 ~ 16828366 (+)
AMCG00020352 NA coding downstream 256041 16897017 ~ 16924481 (+)
AMCG00020351 gnao1,LOC103367675,LOC108264367 coding downstream 325295 16966271 ~ 16979660 (+)
G62504 NA non-coding upstream 68913 16547736 ~ 16565189 (+)
G62494 NA non-coding upstream 98701 16533356 ~ 16535401 (+)
G62480 NA non-coding upstream 129279 16501784 ~ 16504823 (+)
G62432 NA non-coding upstream 145920 16415478 ~ 16488182 (+)
G62398 NA non-coding upstream 533292 16098986 ~ 16100810 (+)
G62564 NA non-coding downstream 3962 16644938 ~ 16646261 (+)
G62617 NA non-coding downstream 152688 16793664 ~ 16793880 (+)
G62654 NA non-coding downstream 346343 16987319 ~ 16989579 (+)
G62681 nudt21 non-coding downstream 389217 17030193 ~ 17046150 (+)
G62680 NA non-coding downstream 390841 17031817 ~ 17035498 (+)
AMCG00020331 st3gal2,LOC107686287,LOC106573711,LOC107672232 other upstream 29444 16582886 ~ 16604658 (+)
AMCG00020281 slc12a4 other upstream 2161557 14467800 ~ 14472545 (+)
AMCG00020273 NA other upstream 2401834 14195784 ~ 14232268 (+)
AMCG00020267 NA other upstream 2683055 13948426 ~ 13951047 (+)
AMCG00020241 cdc26,LOC107743800,LOC107691734,LOC107603191 other upstream 2748986 13882825 ~ 13885116 (+)
G62632 NA other downstream 173398 16814374 ~ 16815857 (+)
AMCG00020370 NA other downstream 792666 17433642 ~ 17442711 (+)
AMCG00020371 nutf2 other downstream 818168 17459144 ~ 17471869 (+)
G62895 NA other downstream 1287352 17928328 ~ 17928904 (+)
AMCG00020408 NA other downstream 1417582 18058558 ~ 18065789 (+)

Expression


Co-expression Network