Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00020349 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030127.1 |
| NCBI id | CM030127.1 |
| chromosome length | 42978078 |
| location | 16827119 ~ 16828366 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0006486 | protein glycosylation | biological_process |
| GO:0005794 | Golgi apparatus | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0008378 | galactosyltransferase activity | molecular_function |
| id | description |
|---|---|
| K18705 | B3GNT9; beta-1,3-N-acetylglucosaminyltransferase 9 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00020349 | True | 1248 | mRNA | 0.61 | 1 | 16827119 | 16828366 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00020341 | bbs2 | coding | upstream | 1673 | 16817583 ~ 16825446 (+) |
| AMCG00020332 | NA | coding | upstream | 146495 | 16666142 ~ 16680624 (+) |
| AMCG00020330 | NA | coding | upstream | 186143 | 16634102 ~ 16640976 (+) |
| AMCG00020338 | NA | coding | upstream | 209876 | 16616416 ~ 16617243 (+) |
| AMCG00020327 | cog4,LOC107577202 | coding | upstream | 269662 | 16550086 ~ 16557457 (+) |
| AMCG00020352 | NA | coding | downstream | 68651 | 16897017 ~ 16924481 (+) |
| AMCG00020351 | gnao1,LOC103367675,LOC108264367 | coding | downstream | 137905 | 16966271 ~ 16979660 (+) |
| AMCG00020350 | gnao1a,LOC100693875,LOC105926579,LOC108264367,LOC103138895,LOC106939917 | coding | downstream | 156221 | 16984587 ~ 16987141 (+) |
| AMCG00020353 | hsf4,LOC106560841,LOC106573731 | coding | downstream | 175552 | 17003918 ~ 17019277 (+) |
| AMCG00020358 | NA | coding | downstream | 213073 | 17041439 ~ 17042458 (+) |
| G62617 | NA | non-coding | upstream | 33239 | 16793664 ~ 16793880 (+) |
| G62564 | NA | non-coding | upstream | 180858 | 16644938 ~ 16646261 (+) |
| G62504 | NA | non-coding | upstream | 261930 | 16547736 ~ 16565189 (+) |
| G62494 | NA | non-coding | upstream | 291718 | 16533356 ~ 16535401 (+) |
| G62480 | NA | non-coding | upstream | 322296 | 16501784 ~ 16504823 (+) |
| G62654 | NA | non-coding | downstream | 158953 | 16987319 ~ 16989579 (+) |
| G62681 | nudt21 | non-coding | downstream | 201827 | 17030193 ~ 17046150 (+) |
| G62680 | NA | non-coding | downstream | 203451 | 17031817 ~ 17035498 (+) |
| G62781 | NA | non-coding | downstream | 576019 | 17404385 ~ 17503263 (+) |
| G62909 | NA | non-coding | downstream | 1125957 | 17954323 ~ 17955274 (+) |
| G62632 | NA | other | upstream | 11262 | 16814374 ~ 16815857 (+) |
| AMCG00020331 | st3gal2,LOC107686287,LOC106573711,LOC107672232 | other | upstream | 222461 | 16582886 ~ 16604658 (+) |
| AMCG00020281 | slc12a4 | other | upstream | 2354574 | 14467800 ~ 14472545 (+) |
| AMCG00020273 | NA | other | upstream | 2594851 | 14195784 ~ 14232268 (+) |
| AMCG00020267 | NA | other | upstream | 2876072 | 13948426 ~ 13951047 (+) |
| AMCG00020370 | NA | other | downstream | 605276 | 17433642 ~ 17442711 (+) |
| AMCG00020371 | nutf2 | other | downstream | 630778 | 17459144 ~ 17471869 (+) |
| G62895 | NA | other | downstream | 1099962 | 17928328 ~ 17928904 (+) |
| AMCG00020408 | NA | other | downstream | 1230192 | 18058558 ~ 18065789 (+) |
| AMCG00020407 | NA | other | downstream | 1239421 | 18067787 ~ 18072051 (+) |
