Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00020352 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030127.1 |
| NCBI id | CM030127.1 |
| chromosome length | 42978078 |
| location | 16897017 ~ 16924481 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0007188 | adenylate cyclase-modulating G protein-coupled receptor signaling pathway | biological_process |
| GO:0007212 | dopamine receptor signaling pathway | biological_process |
| GO:0006184 | obsolete GTP catabolic process | biological_process |
| GO:0005834 | heterotrimeric G-protein complex | cellular_component |
| GO:0003924 | GTPase activity | molecular_function |
| GO:0031821 | G protein-coupled serotonin receptor binding | molecular_function |
| GO:0005525 | GTP binding | molecular_function |
| GO:0004871 | obsolete signal transducer activity | molecular_function |
| GO:0031683 | G-protein beta/gamma-subunit complex binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00020352 | True | 1041 | mRNA | 0.55 | 9 | 16897017 | 16924481 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00020349 | NA | coding | upstream | 68651 | 16827119 ~ 16828366 (+) |
| AMCG00020341 | bbs2 | coding | upstream | 71571 | 16817583 ~ 16825446 (+) |
| AMCG00020332 | NA | coding | upstream | 216393 | 16666142 ~ 16680624 (+) |
| AMCG00020330 | NA | coding | upstream | 256041 | 16634102 ~ 16640976 (+) |
| AMCG00020338 | NA | coding | upstream | 279774 | 16616416 ~ 16617243 (+) |
| AMCG00020351 | gnao1,LOC103367675,LOC108264367 | coding | downstream | 41790 | 16966271 ~ 16979660 (+) |
| AMCG00020350 | gnao1a,LOC100693875,LOC105926579,LOC108264367,LOC103138895,LOC106939917 | coding | downstream | 60106 | 16984587 ~ 16987141 (+) |
| AMCG00020353 | hsf4,LOC106560841,LOC106573731 | coding | downstream | 79437 | 17003918 ~ 17019277 (+) |
| AMCG00020358 | NA | coding | downstream | 116958 | 17041439 ~ 17042458 (+) |
| AMCG00020360 | tmem170a | coding | downstream | 245510 | 17169991 ~ 17174708 (+) |
| G62617 | NA | non-coding | upstream | 103137 | 16793664 ~ 16793880 (+) |
| G62564 | NA | non-coding | upstream | 250756 | 16644938 ~ 16646261 (+) |
| G62504 | NA | non-coding | upstream | 331828 | 16547736 ~ 16565189 (+) |
| G62494 | NA | non-coding | upstream | 361616 | 16533356 ~ 16535401 (+) |
| G62480 | NA | non-coding | upstream | 392194 | 16501784 ~ 16504823 (+) |
| G62654 | NA | non-coding | downstream | 62838 | 16987319 ~ 16989579 (+) |
| G62681 | nudt21 | non-coding | downstream | 105712 | 17030193 ~ 17046150 (+) |
| G62680 | NA | non-coding | downstream | 107336 | 17031817 ~ 17035498 (+) |
| G62781 | NA | non-coding | downstream | 479904 | 17404385 ~ 17503263 (+) |
| G62909 | NA | non-coding | downstream | 1029842 | 17954323 ~ 17955274 (+) |
| G62632 | NA | other | upstream | 81160 | 16814374 ~ 16815857 (+) |
| AMCG00020331 | st3gal2,LOC107686287,LOC106573711,LOC107672232 | other | upstream | 292359 | 16582886 ~ 16604658 (+) |
| AMCG00020281 | slc12a4 | other | upstream | 2424472 | 14467800 ~ 14472545 (+) |
| AMCG00020273 | NA | other | upstream | 2664749 | 14195784 ~ 14232268 (+) |
| AMCG00020267 | NA | other | upstream | 2945970 | 13948426 ~ 13951047 (+) |
| AMCG00020370 | NA | other | downstream | 509161 | 17433642 ~ 17442711 (+) |
| AMCG00020371 | nutf2 | other | downstream | 534663 | 17459144 ~ 17471869 (+) |
| G62895 | NA | other | downstream | 1003847 | 17928328 ~ 17928904 (+) |
| AMCG00020408 | NA | other | downstream | 1134077 | 18058558 ~ 18065789 (+) |
| AMCG00020407 | NA | other | downstream | 1143306 | 18067787 ~ 18072051 (+) |
