AMCG00020359


Basic Information

Item Value
gene id AMCG00020359
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 17072789 ~ 17074242 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020359
ATGGCTGGCAGAACCTCTGAACGCAGAAAGTCGGTGCTCCCTGACGGGAGGTGGTCACTGGTAGGAGGACGCTTGTCGTCTCTTCGGCAGGCTGTGCTCCAGTGGTACAGCGTGCTGGAGAATAAAAGCGCGATCCGCCGTCTGACTCCAAgcaatGTGCTGGCCAAGGCTCTGTACGACAACGTGGCTGAGTCGCCGGACGAGCTGTCCTTCCGCAAGGGCGACATCATGACGGTGCTGGAGCGCGACACGCAGGGGCTGGACGGCTGGTGGCTGTGTTCGCTGCACGGCCGGCAAGGCATCGTCCCTGGCAACCGCCTCAAGATCCTGGTGGGCATGTATGACAAGAAGCAGCCAGGGGGCGGAGGCGGGTTGCAGGGTGGGGGGCAGACGCCCGCCTTGCAGACCCAGCTGGCCCTCCAACAACAGAACGCCTACAGCAAGCCCCCACCCTCCTCGCAGTATACCGCCATGCACCCTGCCTTCCCCAGCCAGACCGACAGCATCTACATGCTGCCCCCCAACCATGGCAAGACATCCCAGAGCCTGTACCAGGTGCCTACTGGGCCCCAGTTCGCCCCCGGCCCAGGCAGCAAAGCCCCTGCGCTGCTCCAGAAGCAGGGCAGCCAGACACAGCCACAGTTCCAGAGCCCCGCTCAGGATATCTACCAAGTGCCCCCCGGGTCCAAGAGCTCTCCTCAGGACATTTACCAGGTGCCCCCTTCTATGAACCAAACTCAGGACATCTACCAGATCCCCCCCTCCCTGGAGAAGAGGAGCTGGGACTCCCCCAAACCTCCGGGAAAGGGCTGTGCACCTCCGGCTCTGTCTCCAGGGTTTCCTACTCAACCCCCACCTGACACGGGACAGGCCTGTCTGACCAGCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020359 True 888 mRNA 0.63 3 17072789 17074242

Neighbor

gene id symbol gene type direction distance location
AMCG00020354 NA coding downstream 15547 17049350 ~ 17057242 (-)
AMCG00020355 nudt21,LOC107660760,LOC107690386,LOC107721012 coding downstream 40677 17028087 ~ 17032112 (-)
AMCG00020356 NA coding downstream 46122 17021852 ~ 17026667 (-)
AMCG00020357 NA coding downstream 72776 16994885 ~ 17000013 (-)
AMCG00020343 cbfb,LOC107715607 coding downstream 202611 16867232 ~ 16870178 (-)
AMCG00020363 NA coding upstream 64420 17138662 ~ 17139769 (-)
AMCG00020367 NA coding upstream 242855 17317097 ~ 17325531 (-)
AMCG00020372 NA coding upstream 318315 17392557 ~ 17402108 (-)
AMCG00020374 ranbp10,LOC106560827 coding upstream 334312 17408554 ~ 17415648 (-)
AMCG00020375 ranbp10,LOC107726299,LOC107694918,LOC107733562 coding upstream 351069 17425311 ~ 17432646 (-)
G62675 NA non-coding downstream 53237 17018790 ~ 17019552 (-)
G62660 NA non-coding downstream 82075 16990267 ~ 16990714 (-)
G62659 NA non-coding downstream 83505 16987319 ~ 16989284 (-)
G62655 gnao1a,gnao1,LOC108264367,LOC108249535,LOC106925363,LOC103367675 non-coding downstream 149056 16896870 ~ 16923733 (-)
G62582 NA non-coding downstream 392165 16679856 ~ 16680624 (-)
G62715 NA non-coding upstream 45912 17120154 ~ 17175835 (-)
G62770 pard6a,LOC108250860,LOC106523998,LOC107101591 non-coding upstream 290581 17364823 ~ 17370446 (-)
G62880 NA non-coding upstream 773916 17848158 ~ 17851113 (-)
G62951 cnot1 non-coding upstream 893991 17968233 ~ 17969691 (-)
G62981 NA non-coding upstream 1063238 18137480 ~ 18138298 (-)
AMCG00020346 nup93,LOC103368977 other downstream 255022 16794996 ~ 16817767 (-)
G62618 NA other downstream 279622 16792866 ~ 16793167 (-)
AMCG00020336 NA other downstream 447819 16616323 ~ 16624970 (-)
G62421 LOC103138816,LOC103466733,LOC108251456 other downstream 797216 16272451 ~ 16275573 (-)
G62415 NA other downstream 817670 16252788 ~ 16255119 (-)
G62853 necab2 other upstream 536422 17610664 ~ 17626189 (-)
AMCG00020403 NA other upstream 912939 17987181 ~ 18015862 (-)
G62961 NA other upstream 931926 18006168 ~ 18039960 (-)
AMCG00020446 cssa11h16orf87,cunh16orf87,clg02h16orf87,zgc:92818,LOC106587296,LOC103043940,LOC107757775 other upstream 3214328 20288570 ~ 20299843 (-)
G63464 NA other upstream 4237960 21312202 ~ 21312605 (-)

Expression


Co-expression Network