AMCG00020367


Basic Information

Item Value
gene id AMCG00020367
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 17317097 ~ 17325531 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020367
tttttcttttgtattttatataataaattaaactttacaCTGAGGCTGCTTAACGTaatgatgcatttttaatgttttattttctctaagaCTCAATTGTCAATTGTTGTGAAGTTGACTGGAACCAAAAACCCAGGAGCCGTTGCGTCCGCGGGGGAAGAGGGATGTGTGATGGACTGAAGCGGGAGATAGGAAATAGCaggttttaaaatactTCCAGGCCCCGCAGGGAGAGAATAAGGAGTCCCTGGTGAGGACCAGAATGGCAGCATGGCAGTGAAGAGGCGGACGGGCATCCAGCCCTGGATCGAGAGCCTGCTGGACCAGTACAGCCAAGCGCAGGAGCTGACGGTCTCTGTCAAGGCCCACGTCATTGGGTTTGGGAACCTGTCAGGGCTGCACAATGGACAGGTGGACAACCCCGCCGCCGTCGTCTTCCTCTCCGACCACAAGGTCTACATCCCAGGCATCATCACCACCAGCGCCtgggaggagctggagcaAGAGGAAGACTGTTGTTCTTTTACAGACCTCAAGGACTATATTGTAATCCTGGTCAAATACAGCATCATGTTCCAGTTGGAAAAAGAAGAGAGTAAATCTCAGTTCTTTCTGGTGATCACGAAACTGCGCACTCTGAGGTTAGAGCCAGTGTTGCAGGACGTACCCAACTGGTCAagtctggaggaggaggacagcaTGATGAGTCACAACAACTCAGCGTACTGCCTGACACAGCTGCTGGGTCTCCTGGACCAGGAGAAGGTCAGGAACCTGAATAACACAGTGAGGGAGTGTCTGGATGCCGGCGCCCTCCACCCACAGCCCTCCACATCCCACGCGCCCCCACCGCCAGCCAACACCCCCCTCAAAGGCTGGAGTCGTGACAGGATCCTGAACAAGgGAAAGACACCTTTCACTGTCCCCGTCTCCCACCTCATCATCCCTGCCCAGCAGAGGGAGCTTCTCACCACAGGCCCAGCACTGTGGGAGGACAGCGGACCAGCGCAGAGCCCCACCTCAGGGACGGCCGGGGTGAGACAGCAAGTCATTGAGATCGGTAGCTCAGTGGAGTCTGAGCAGCAGCTGGAAGAGGATGCAGACCTGCCTGACCCCGGACAGGACACCACTAGTGgatCTTTAACTCCTGACACCCTCCCAGAGCCACAGAGTCCTCTGTTACTCCCACAGTGCAGAGTGGGTCCCTCCTCCGCCCCCTGCTCTGCCAGCTCTGTCCCAGAGGCCACAGGGCAGCACCCTTGCACCCAGCAGCCTCCCGGGGAGGACTCCCTCCGGCCATCCAGGACACCCATACTGTTCCGACAAATCTGCCTCTCCCACAGAGGACCGGAGAAGGAAGCGGAGGTGCTGGATGTCACCCCGCAGCAGCTGAGCCAGGTGTCTCCAGACAGCAGCCTCCCCGCGTACCAGAAACCACGACCTTCCCGCCCCTTGCCCTTAaccctctcccccctctccccgGCCCGGGTGACTGCTGGCACGGGCACCGAGTCCTGCCAAGGCTCCAGAGCTGTCCAGCCGCTGTCGCTCCCCAGTCACCCCTGTGCCGCGGAGGCCCCCAGACGCACACCCCTGGCTTTCCTCACGCTGGGGCCGCTGGGCGGGctggaggagaggaaggagaatGTTCTCCAGAGGAAAGCAGGTAACACCAAGAGGAAGCAGAGGGAGCCGGTCGTGAGCCTCCATGAGGAGCCTGTCGTGGATGCGGGGGCCCAGCCTCGTCCCCAGGCTGTCGCCAGCTCCCCCAAGAGGAGCACTCAGGCCAGCAGCCTGACACAGTCCATACTGCCCCTGCAAAGCCAGGGGCCAAACCACAGGGCCGACAGCGATGGTGTGTCCAGAAGGCCTCACAAACATGCAGCCAGACAGTGCCCCCAGCCTGCCAACACGCATGCTGATGGAGCTACATTCATGTATAGCTACAAGCCCTCAGGCAGTGTGATGCAGGCCGTGAGCTCTCTTAGGGTTTCGGAGGAGCTGCTGCGGTGGTCTGTGCGGTACCTCATCAACCCAGGCGGCTCTGAAGACCGTGGCTGAGCCCGGGGAGGTGTCGGCCCAGTGGAGTATCACCAGCATTGGCAGGTTGGCTTGGTCTCCGTGGAGTGCACACCAGGCAGCTCGAGGACAGCTTTTATTCTTGCGTGTGGATCGAGGTCCAGCTGCATCCCGCAGACCACAGgtctggagcagcagcagctgttgATGCACATCCCAGTCTCAGTAAGGTACTTtggataaaagaaaaacaagaacaccaCTGCCCCCTTGTACTTCTGTAATTGACCGACATGAGAAGGGTGGCATTGCAGTTATTCATGTTCGgaggttttaaatattttcacataAAGACAGATAACTTATAGCTTAGAATAACTTAGGATGTTCTGACtttgacagttttgtttttttgattataTGTTactgtttacattaaaacacctcgataaagacatttcagtttctgGTGTTCTGGATCTCGTTTCCATTAACTTCAGAATCTCCTTTGATGCAGTCGGCGTGACGTATTTCACCTGGACTTGTTTTCCCTCAAGTCGCGGCATTCCAGGTGTCTCTGTGCGTGAACTGTATGAAGGCATTTCTGTGATCCACAACTGAATGCCAGCCTCCATGATGTTGAGTTGCGTCAGTTGATGTTAATTGTGGAACCCCTGGATATACCTCGTGAATTGGTACAGCACTCTTGCCAGAAGAGTCTTTCTACAATTGTTCTGTGACGCTGAgtgggtgtgggggggaaatGTGGAAGCAAATgttgatcttttttttattttttaagtgtgtatatatagcatgCGTAGTGTGTTCTCTTATTATTGTAAGTGTGTCACATATACACTGTTGTTTCACTGATGATCCAGCCGAGGTAGACGGGGGTTGGCGCTGCATGGCCATCTTTTCCCCCATCTCTTCTTTGTTGCTTGTTGTCTTGCCAGTCTACTCCCCACCCCATCCACAGGCTCCTCCCCAAGCCTGTGGGGACCCTGGATGCCAGCAGGGGTAGGCAGATGTGTTCGAGAGACGCACAGCAACAATATCCGAGCCCACCCTGTTTAACGggatctttttgtttttttaagactaaaaaaaaaaaaaaaaaa

Function

GO: NA

KEGG:

id description
ko03013 Nucleocytoplasmic transport
ko03030 DNA replication
ko03440 Homologous recombination
ko04110 Cell cycle
ko04111 Cell cycle - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020367 True 3143 mRNA 0.54 14 17317097 17325531

Neighbor

gene id symbol gene type direction distance location
AMCG00020363 NA coding downstream 177328 17138662 ~ 17139769 (-)
AMCG00020359 NA coding downstream 242855 17072789 ~ 17074242 (-)
AMCG00020354 NA coding downstream 259855 17049350 ~ 17057242 (-)
AMCG00020355 nudt21,LOC107660760,LOC107690386,LOC107721012 coding downstream 284985 17028087 ~ 17032112 (-)
AMCG00020356 NA coding downstream 290430 17021852 ~ 17026667 (-)
AMCG00020372 NA coding upstream 67026 17392557 ~ 17402108 (-)
AMCG00020374 ranbp10,LOC106560827 coding upstream 83023 17408554 ~ 17415648 (-)
AMCG00020375 ranbp10,LOC107726299,LOC107694918,LOC107733562 coding upstream 99780 17425311 ~ 17432646 (-)
AMCG00020373 NA coding upstream 117954 17443485 ~ 17451798 (-)
AMCG00020382 NA coding upstream 224220 17549751 ~ 17559095 (-)
G62715 NA non-coding downstream 141262 17120154 ~ 17175835 (-)
G62675 NA non-coding downstream 297545 17018790 ~ 17019552 (-)
G62660 NA non-coding downstream 326383 16990267 ~ 16990714 (-)
G62659 NA non-coding downstream 327813 16987319 ~ 16989284 (-)
G62655 gnao1a,gnao1,LOC108264367,LOC108249535,LOC106925363,LOC103367675 non-coding downstream 393364 16896870 ~ 16923733 (-)
G62770 pard6a,LOC108250860,LOC106523998,LOC107101591 non-coding upstream 39292 17364823 ~ 17370446 (-)
G62880 NA non-coding upstream 522627 17848158 ~ 17851113 (-)
G62951 cnot1 non-coding upstream 642702 17968233 ~ 17969691 (-)
G62981 NA non-coding upstream 811949 18137480 ~ 18138298 (-)
G63015 NA non-coding upstream 858477 18184008 ~ 18186050 (-)
AMCG00020346 nup93,LOC103368977 other downstream 499330 16794996 ~ 16817767 (-)
G62618 NA other downstream 523930 16792866 ~ 16793167 (-)
AMCG00020336 NA other downstream 692127 16616323 ~ 16624970 (-)
G62421 LOC103138816,LOC103466733,LOC108251456 other downstream 1041524 16272451 ~ 16275573 (-)
G62415 NA other downstream 1061978 16252788 ~ 16255119 (-)
G62853 necab2 other upstream 285133 17610664 ~ 17626189 (-)
AMCG00020403 NA other upstream 661650 17987181 ~ 18015862 (-)
G62961 NA other upstream 680637 18006168 ~ 18039960 (-)
AMCG00020446 cssa11h16orf87,cunh16orf87,clg02h16orf87,zgc:92818,LOC106587296,LOC103043940,LOC107757775 other upstream 2963039 20288570 ~ 20299843 (-)
G63464 NA other upstream 3986671 21312202 ~ 21312605 (-)

Expression


Co-expression Network