Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00020377 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030127.1 |
| NCBI id | CM030127.1 |
| chromosome length | 42978078 |
| location | 17385156 ~ 17385546 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00020377 | True | 252 | mRNA | 0.49 | 2 | 17385156 | 17385546 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00020368 | pard6a,LOC108250860 | coding | upstream | 19542 | 17364458 ~ 17365614 (+) |
| AMCG00020369 | LOC107733556 | coding | upstream | 44180 | 17339756 ~ 17340976 (+) |
| AMCG00020366 | NA | coding | upstream | 68238 | 17276550 ~ 17316918 (+) |
| AMCG00020364 | NA | coding | upstream | 113624 | 17261682 ~ 17271532 (+) |
| AMCG00020365 | NA | coding | upstream | 126199 | 17237808 ~ 17258957 (+) |
| AMCG00020376 | thap11 | coding | downstream | 67382 | 17452928 ~ 17453764 (+) |
| AMCG00020380 | NA | coding | downstream | 87351 | 17472897 ~ 17500277 (+) |
| AMCG00020379 | NA | coding | downstream | 132281 | 17517827 ~ 17520204 (+) |
| AMCG00020378 | pskh1 | coding | downstream | 152579 | 17538125 ~ 17549842 (+) |
| AMCG00020381 | mbtps1,LOC107596929 | coding | downstream | 173991 | 17559537 ~ 17584315 (+) |
| G62681 | nudt21 | non-coding | upstream | 339006 | 17030193 ~ 17046150 (+) |
| G62680 | NA | non-coding | upstream | 349658 | 17031817 ~ 17035498 (+) |
| G62654 | NA | non-coding | upstream | 395577 | 16987319 ~ 16989579 (+) |
| G62617 | NA | non-coding | upstream | 591276 | 16793664 ~ 16793880 (+) |
| G62564 | NA | non-coding | upstream | 738895 | 16644938 ~ 16646261 (+) |
| G62781 | NA | non-coding | downstream | 18839 | 17404385 ~ 17503263 (+) |
| G62909 | NA | non-coding | downstream | 568777 | 17954323 ~ 17955274 (+) |
| G62912 | NA | non-coding | downstream | 595487 | 17981033 ~ 17983521 (+) |
| G62916 | NA | non-coding | downstream | 602302 | 17987848 ~ 18032139 (+) |
| G62975 | NA | non-coding | downstream | 749447 | 18134993 ~ 18138267 (+) |
| G62632 | NA | other | upstream | 569299 | 16814374 ~ 16815857 (+) |
| AMCG00020331 | st3gal2,LOC107686287,LOC106573711,LOC107672232 | other | upstream | 780498 | 16582886 ~ 16604658 (+) |
| AMCG00020281 | slc12a4 | other | upstream | 2912611 | 14467800 ~ 14472545 (+) |
| AMCG00020273 | NA | other | upstream | 3152888 | 14195784 ~ 14232268 (+) |
| AMCG00020267 | NA | other | upstream | 3434109 | 13948426 ~ 13951047 (+) |
| AMCG00020370 | NA | other | downstream | 48096 | 17433642 ~ 17442711 (+) |
| AMCG00020371 | nutf2 | other | downstream | 73598 | 17459144 ~ 17471869 (+) |
| G62895 | NA | other | downstream | 542782 | 17928328 ~ 17928904 (+) |
| AMCG00020408 | NA | other | downstream | 673012 | 18058558 ~ 18065789 (+) |
| AMCG00020407 | NA | other | downstream | 682241 | 18067787 ~ 18072051 (+) |
