AMCG00020391


Basic Information

Item Value
gene id AMCG00020391
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 17775984 ~ 17794499 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020391
GTACTGCATCTAGCACtgtaccccccctcccccaccttcTCCATCCTAACACGTCTCTCTTGGTCTCATGATCTAGGGGAGGATATCTACATCAGCCTGTATGGAGCAGCCACTGACATTAATGTACGACTGGACAAGAACTCTGTAATTATTGGAAAAACATACATCACCATGGCCAATCAGCGCTCAGTTGCCATCATCAACAGGAGTGATGTCATTGTGCACTTCCAGTGGAAAATCTTCGCCACTGATGAAGAGGAGGATCAGCAAAAGCTCAGGTCCTGCTCGGAGCTgcggagggaggaggaggaggaggaggaggagatggaccCTTTCCTGGCAGAGTGTGTGGCAGACCCCACAGCCCGAGACAAGCTCTCCATCCTCTCCCCCACCTTCCACAGCCGGCGGAGACCGCTGCAGGATGACCAGCTCACCTTCTTCCACGACTTCATCCTCATCGACCCACTGGAGGGAGACATCTGGCCCAACTCCACTGCTGCagtgaatattatttttaagccacAAGAGGCAAAGATCTACAAACAAGCTGTGTATTGTGACATTACAGGTCGAGAGTCCCGTCTGCCTCTCAGGATTAAAGGGGAAGGCACTGGCCCCAAGCTGCAGTTCAGCTTTGACCAGCTGGATGTGGGGAACCTCTTTGTTGGCTCGAAGCACAGCTATGAGGTGCTATTGACCAACAAAGGTCTCATTGATGCCACCTTCAGCCTGGTGCCACCCACCTCCGCCCTGGGCTCCTGCTTTTCCTTCAGCCCCAGTGAAGGGACTGTGCTGCCTGGAGCCTGCCAGGCCATGGAGGTCACTTTTTCCTCCAGCATCCTAGGCACCTTCTATGAGGAGTTTTTCTTCTCAGTCATGGGAAATCCACAGAACGTTGTCCTCACCTTCAGGGGCTGTGTCATCGGACCCACATTTCACTTCAATGTGCCTGAGCTGAATTTTGGTGATGTATCCTTCGGGTTTCCTCACACTTTGACCTGCTGCATGAACAACACCTCCCTGGTGCCCCTGACCTTCAGCCTGCGTGTCCCTGGGGATGGCAGTGAGGAGGGCAGTGTGACCAGCACCATCCAGGTCTCAGACTTAAACAGGACAGCTTGGGGGAGCAGCCAGGCAGCCCAGCCCAGAGAGTTCACTGTGACCCCCAGCTCTGGGACTGTGAGCCTCTGCTCCAACACGGTGCAGCGCTATGAGGCGGCCCTGGTGGTGGACGTCCAGGGTGTTGGAGAGGAGGTTCTAGCTCTGCCCATCATTGCCAGGTGTGTCGTACCTGCTTTGCGCTTGGAGACACCCATTTTGGAGTTCCGTAGATGCTTTCTGAATCACCCCTATGACCGGACAGTGAAGCTGGCTAATGACAGCAACCTGCCGGCTTGCTATGGTTTGCTTTCCCAGGAGTATGAGGAACACCCTTCCCTGCTGTACTCCAGCCGTCAGTCCCGGGGCATTATCGACCCCAACTCTGAGCTGGAGATCCCCCTGCTTCTGCAGGCAAAGACCACAGGCAGGCTTGAGACTGTGGCACAGATTGCTGTGTTTGGCAGTGAGGAACCACCACTGGAGGTGCGACTGTCCTGCATTGGTGAAGGACCAGTTGTTCATATTAAAGCCACTGAAGTGGATTTTGGAAACATCCCCGTTTTAACAGACATATCCAGGACACTGCAGCTGTCTAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020391 True 1701 mRNA 0.54 11 17775984 17794499

Neighbor

gene id symbol gene type direction distance location
AMCG00020392 NA coding downstream 14104 17708113 ~ 17761880 (-)
AMCG00020385 necab2,LOC106936069 coding downstream 102309 17659861 ~ 17673675 (-)
AMCG00020382 NA coding downstream 216889 17549751 ~ 17559095 (-)
AMCG00020373 NA coding downstream 324186 17443485 ~ 17451798 (-)
AMCG00020375 ranbp10,LOC107726299,LOC107694918,LOC107733562 coding downstream 343338 17425311 ~ 17432646 (-)
AMCG00020390 NA coding upstream 11032 17805531 ~ 17810647 (-)
AMCG00020389 NA coding upstream 18816 17813315 ~ 17816888 (-)
AMCG00020397 NA coding upstream 132013 17926512 ~ 17930590 (-)
AMCG00020398 NA coding upstream 155835 17950334 ~ 17955926 (-)
AMCG00020400 NA coding upstream 186896 17981395 ~ 17984641 (-)
G62770 pard6a,LOC108250860,LOC106523998,LOC107101591 non-coding downstream 405538 17364823 ~ 17370446 (-)
G62715 NA non-coding downstream 600149 17120154 ~ 17175835 (-)
G62675 NA non-coding downstream 756432 17018790 ~ 17019552 (-)
G62660 NA non-coding downstream 785270 16990267 ~ 16990714 (-)
G62659 NA non-coding downstream 786700 16987319 ~ 16989284 (-)
G62880 NA non-coding upstream 53659 17848158 ~ 17851113 (-)
G62951 cnot1 non-coding upstream 173734 17968233 ~ 17969691 (-)
G62981 NA non-coding upstream 342981 18137480 ~ 18138298 (-)
G63015 NA non-coding upstream 389509 18184008 ~ 18186050 (-)
G63057 NA non-coding upstream 563326 18357825 ~ 18358910 (-)
G62853 necab2 other downstream 149795 17610664 ~ 17626189 (-)
AMCG00020346 nup93,LOC103368977 other downstream 958217 16794996 ~ 16817767 (-)
G62618 NA other downstream 982817 16792866 ~ 16793167 (-)
AMCG00020336 NA other downstream 1151014 16616323 ~ 16624970 (-)
G62421 LOC103138816,LOC103466733,LOC108251456 other downstream 1500411 16272451 ~ 16275573 (-)
AMCG00020403 NA other upstream 192682 17987181 ~ 18015862 (-)
G62961 NA other upstream 211669 18006168 ~ 18039960 (-)
AMCG00020446 cssa11h16orf87,cunh16orf87,clg02h16orf87,zgc:92818,LOC106587296,LOC103043940,LOC107757775 other upstream 2494071 20288570 ~ 20299843 (-)
G63464 NA other upstream 3517703 21312202 ~ 21312605 (-)
AMCG00020471 NA other upstream 4336343 22130842 ~ 22132737 (-)

Expression


Co-expression Network