AMCG00020399


Basic Information

Item Value
gene id AMCG00020399
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 17905597 ~ 17912140 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020399
ATGGGTCCCAGGGAGCACCTGGAGCCAGCCCTGGTGCTGCAGTGGCTGGGAAGTGCACTGAAGAAGGCCTGGggccaaagaaaaacattgaaagtTACCTTTGGGGGGGCGGAGTGTCCCTGCAGGCTGCAACTGGAGAATCCTTCAGGCCAGAGGCTGTATGTAAACCTGGTGCCCGCAGTGAGAGTGGAGGGCACCAATGCTTTCCTGGTCACCCAGGGACCCGTGCTGCGGCCTCCAGAGCACTGGGTCCAGTGGTTCAGCGTGGACGAGGGCAACTTCCTGCGGGACGTGACTCAGAAGATGCCAAGTAATTCCTGCCacctaaaatgtttgcacatgCTGTCCGTCGCCAACACCAAGCCAGCGTCTCTCAGCCCAGAGGACCCTGTGTCCTCCTTCCTGACCTCCTACCATCTGAAGACAATCCTGATGTACATGCTGCTCAGATGGCCTGATCCGCGGGACTGGACGCAGAGGCAGCTATCTAGGCAGCTCCAAATCGCCCTTGGTGTGCTAGCGAAACACCTGGAGTGCAAGTGGCTCCCCCACTGTGTGCAGGGGTCCCGGGACCTGGGCTCGCTCCAGGGGATGCCCCCCGTGTTCCCCCACACCTCGTCCGTCAACCTCTTCGAGCCACTGAATCAGGACCCCCATCTGCACATGGTGGCAATGAAAGACTTCCGGCGGCTAACAGCACGGCTCAGGATGTGGAGAAGGTGGAAGAGGGAGCCAAAGGCCAAGCCAGAGGAAGAGTCAGTGGCCGAGTTAGAGGCTGATACAGAGGTCGAGCCAGAGGAGGAGTCAGAGGAAGAGTCAGTGGCCGAGCCAGAGGTCGAGCCAGAGGAGGAGCCAGAGGAGGGGTCAGAGGAGGAGTCAGTAGCCGACCCAGAGGAAAAGTCAGTGACCGACCCAGAGGAAAAGTCAGTGGCCAACCCAGACGTCGAGCCAGAGGCTGAGCCAGAGGAGGAGTCAGAGGAAGAGTCAGTAGCCGAACCAGAGAAAGAGTCAGAGGCTGGGCCAGAGAAAGAGTCAGAGGCTGGGCCAGAGGCCAACCCACAGGAAGAGTCAGTGTCAAATCCAGAGGTTTGGACCAAGAAGCAGCTGATAGCCAAGCTTAAAGTAATCTCAAAAGGTGGTGTTgctggagacagagacagagacatttgttttgtcCAAGAGGTGGTGGAACATCTCCTGGATGTGGCACGGGACTCCAGCCAGCTGTGCACCGACATGCTGCAGGAAGGCTGTGTGGGTGTGGGCAGCCAGTTTGAGGGCGGTTGGAGCAGCGGAAGACAGCAGGAGCCTGATTTTGATATGTTGGTGGTCATCAACCCGCCCCGCACTCTCTCCTTCCAGGGTGTGCCACCCAGGCCTCATGAGCTGAAGAGCAGCCCAGACTGGATGGGCCCCGAGGAGCACCTGGAGCCAGCCCTGGTGCTGCAGTGGCTGGGAAGTGCACTGACGAAGGCCTGGGGTCAAAGAAAGACATTGAAAGTTACCTTTGGGGGGGCGGAGTGTCCCTGCAGGCTGCAACTGGAGAATCCTTCAGGCCAGAGGATGTATATAAACCTGGTGCCCGCAGTGAGAGTGGAGGGCACAAATGCTTTCCTGGTCACCCAGCGACCCGTGCTGCGGCCTCCAGAGCACTGGGTCCAGTGGTTCAGCGTGGACGAGGGCAACTTCCTGCGGGATGTGACTCAGAAGATGCCAAGTAATTCCTGCCACCTAAAATGTCTGCACATGCTCTCCGTCGCCAACACCAAGCCAGCGTCTCTCAGCCCAGAGGACCCTGTGTCCTCCTTCCTGACCTCCTACCATCTGAAGACGATCCTGATGTACATGCTGCTCAAATGGCCTGATCCGCGGGACTGGACGCAGAGGCAGCTATCTAGGCAGCTCCAAATCGCCCTTGGTGTGCTAGAGAAACACCTGCAGTGCAAGTGGCTCCCCCACTGTGTGCAGGGGTCCCGGGACCTGGGCTCGCTCCAGGGGATGCCCCCCGTGTTCCCCCACACCTCGTCCGTCAACCTCTTCGAGCCACTGAATCAGGACCCCCATCTGCACATGGTGGCAATGAAAGACTTCCGGCGGCTAACAGCACGGCTCAGGATGTTCACACGCAGTTTCTGTGAAAAGACCAGACGCAGGAACAGCGAAATCGCAGAGAACAGGCTGAATGAATGGCCGCTTACTGCACAACAGCACTATGCCATCTACAAACGGCAAAGCTGGCCGGGGTTCAGCTTGCTTCGCACATGCGCTCTGTGTCGCATCAGCTCCCATCATGCACACCTGCTCTTCGGCTGGCTGGAAAGCTGCCATTCCCGCTACTTGTCTCTTGTGCCAGTGTACTATGTCACATCACCTCAGAAGGACGATAGGTATAAGGGTCCACCCCCCACTCCACCCGGATACAACGGACTCTCCTTAGTGGATGTAAAGGAAGGAGGACCCCGCCACCCACACTTAAAACCTCCACAGTATAGCGTGGCAGTGCAGaggtcaaagttgatgaaggcCCCCTGTGCCATTGCTTGCCAGCCCAAAGCTGTAATGCGTACAAAGAGACTAGCTCAGTGCCAGATGCAAACCCGACAAGACCTTGACCCTAGACTAGGAAGTGTTATTCTGCAGGGCCAACAGGATAGTGAGGATGATGTGTACTATGTCACATCACTTCAGAAGGACGATAGGTATAAGGGTCCACCCCCCACTCCACCTGGATACCAGGGACTCTCCTTAGTGGATGTAAAGGAAGGAGGACCCCGCCACCCACACTTAAAACCTCCACAGTATAGCATGGCAGTGCAGaggtcaaagttgatgaaggcCCCCTGTGCCATTGCTTGCCAGCCCGAAGGTGTAATGCGTACGAAGAGACTAGCTCAGTGCCAGATGCAAACCCGACAAGACCTTGACCCTAGACTAGGAAGTGTTATTCTGCAGGGCCAACAGGATAGTGAGGATGATGGCAAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020399 True 2985 mRNA 0.57 6 17905597 17912140

Neighbor

gene id symbol gene type direction distance location
AMCG00020387 calb2,LOC106573754,LOC105904495,LOC106560817 coding upstream 16810 17872823 ~ 17888787 (+)
AMCG00020388 NA coding upstream 57247 17837383 ~ 17848350 (+)
AMCG00020386 NA coding upstream 74531 17824817 ~ 17831066 (+)
AMCG00020384 NA coding upstream 295514 17597133 ~ 17610083 (+)
AMCG00020383 NA coding upstream 314289 17586137 ~ 17591308 (+)
AMCG00020393 got2,got2a,LOC107694944,LOC107596935,LOC107738675,LOC107672286,LOC107726360,LOC107707915 coding downstream 5829 17917969 ~ 17926416 (+)
AMCG00020394 slc38a7,LOC107707914,LOC107711584,LOC107596460 coding downstream 18789 17930929 ~ 17941836 (+)
AMCG00020396 NA coding downstream 33018 17945158 ~ 17950059 (+)
AMCG00020395 cnot1 coding downstream 44568 17956708 ~ 17980551 (+)
AMCG00020406 e2f4,LOC106573204 coding downstream 207573 18119713 ~ 18134812 (+)
G62781 NA non-coding upstream 402334 17404385 ~ 17503263 (+)
G62681 nudt21 non-coding upstream 859447 17030193 ~ 17046150 (+)
G62680 NA non-coding upstream 870099 17031817 ~ 17035498 (+)
G62654 NA non-coding upstream 916018 16987319 ~ 16989579 (+)
G62617 NA non-coding upstream 1111717 16793664 ~ 16793880 (+)
G62909 NA non-coding downstream 42183 17954323 ~ 17955274 (+)
G62912 NA non-coding downstream 68893 17981033 ~ 17983521 (+)
G62916 NA non-coding downstream 75708 17987848 ~ 18032139 (+)
G62975 NA non-coding downstream 222853 18134993 ~ 18138267 (+)
G62989 NA non-coding downstream 285439 18197579 ~ 18200808 (+)
AMCG00020371 nutf2 other upstream 433728 17459144 ~ 17471869 (+)
AMCG00020370 NA other upstream 462886 17433642 ~ 17442711 (+)
G62632 NA other upstream 1089740 16814374 ~ 16815857 (+)
AMCG00020331 st3gal2,LOC107686287,LOC106573711,LOC107672232 other upstream 1300939 16582886 ~ 16604658 (+)
AMCG00020281 slc12a4 other upstream 3433052 14467800 ~ 14472545 (+)
G62895 NA other downstream 16188 17928328 ~ 17928904 (+)
AMCG00020408 NA other downstream 146418 18058558 ~ 18065789 (+)
AMCG00020407 NA other downstream 155647 18067787 ~ 18072051 (+)
G63045 NA other downstream 420429 18332569 ~ 18334032 (+)
AMCG00020439 LOC107696663,LOC107556242,LOC107746488,LOC107726063 other downstream 1685063 19597203 ~ 19602324 (+)

Expression


Co-expression Network