Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00020402 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030127.1 |
| NCBI id | CM030127.1 |
| chromosome length | 42978078 |
| location | 18029373 ~ 18039986 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0008146 | sulfotransferase activity | molecular_function |
| GO:0016782 | transferase activity, transferring sulfur-containing groups | molecular_function |
| id | description |
|---|---|
| ko00830 | Retinol metabolism |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00020402 | True | 1239 | mRNA | 0.49 | 5 | 18029373 | 18039986 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00020400 | NA | coding | downstream | 44732 | 17981395 ~ 17984641 (-) |
| AMCG00020398 | NA | coding | downstream | 73447 | 17950334 ~ 17955926 (-) |
| AMCG00020397 | NA | coding | downstream | 98783 | 17926512 ~ 17930590 (-) |
| AMCG00020389 | NA | coding | downstream | 212485 | 17813315 ~ 17816888 (-) |
| AMCG00020390 | NA | coding | downstream | 218726 | 17805531 ~ 17810647 (-) |
| AMCG00020401 | NA | coding | upstream | 10847 | 18050833 ~ 18055929 (-) |
| AMCG00020404 | NA | coding | upstream | 31310 | 18071296 ~ 18079151 (-) |
| AMCG00020411 | NA | coding | upstream | 49113 | 18089099 ~ 18092504 (-) |
| AMCG00020410 | NA | coding | upstream | 64202 | 18104188 ~ 18110182 (-) |
| AMCG00020409 | NA | coding | upstream | 131634 | 18171620 ~ 18175979 (-) |
| G62951 | cnot1 | non-coding | downstream | 59682 | 17968233 ~ 17969691 (-) |
| G62880 | NA | non-coding | downstream | 178260 | 17848158 ~ 17851113 (-) |
| G62770 | pard6a,LOC108250860,LOC106523998,LOC107101591 | non-coding | downstream | 658927 | 17364823 ~ 17370446 (-) |
| G62715 | NA | non-coding | downstream | 853538 | 17120154 ~ 17175835 (-) |
| G62675 | NA | non-coding | downstream | 1009821 | 17018790 ~ 17019552 (-) |
| G62981 | NA | non-coding | upstream | 97494 | 18137480 ~ 18138298 (-) |
| G63015 | NA | non-coding | upstream | 144022 | 18184008 ~ 18186050 (-) |
| G63057 | NA | non-coding | upstream | 317839 | 18357825 ~ 18358910 (-) |
| G63092 | NA | non-coding | upstream | 357481 | 18397467 ~ 18398731 (-) |
| G63096 | NA | non-coding | upstream | 396539 | 18436525 ~ 18436939 (-) |
| AMCG00020403 | NA | other | downstream | 13511 | 17987181 ~ 18015862 (-) |
| G62853 | necab2 | other | downstream | 403184 | 17610664 ~ 17626189 (-) |
| AMCG00020346 | nup93,LOC103368977 | other | downstream | 1211606 | 16794996 ~ 16817767 (-) |
| G62618 | NA | other | downstream | 1236206 | 16792866 ~ 16793167 (-) |
| AMCG00020336 | NA | other | downstream | 1404403 | 16616323 ~ 16624970 (-) |
| AMCG00020446 | cssa11h16orf87,cunh16orf87,clg02h16orf87,zgc:92818,LOC106587296,LOC103043940,LOC107757775 | other | upstream | 2248584 | 20288570 ~ 20299843 (-) |
| G63464 | NA | other | upstream | 3272216 | 21312202 ~ 21312605 (-) |
| AMCG00020471 | NA | other | upstream | 4090856 | 22130842 ~ 22132737 (-) |
| AMCG00020489 | rnf166,LOC106587267,LOC106562062,LOC107685853 | other | upstream | 4400806 | 22440792 ~ 22466767 (-) |
| G63679 | NA | other | upstream | 4503856 | 22543842 ~ 22544689 (-) |
