AMCG00020410


Basic Information

Item Value
gene id AMCG00020410
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 18104188 ~ 18110182 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020410
ATGCTGGGCTTGCTCTTTCTCCTGTGGGCTGGGCTTCTCCTCCTCTATTTCCTGTGGAAGACAGGGAGGCCCAAGAATTTTCCACCTGGTCCACAGCTTTTTCCAATATGTGGGAATCTTCTGCAACTCAACCTGAAGAACCCCATGAAAGACTTTGAAAAGCTCTCCAAGCGCTATGGGAAAGTGTACAGCGTGTATTTCGGGGGCAGGCCAGTTGTGTTACTGCATGGTTTGCAGGCAGTGAAGGAAGCCCTGATGACTCGGGGATCCTTGGACCCTCAAATGTTGTTctacaatgcaatttccaatgTCATCTGTGCCATCCTACTTGGATCCCGCTACAACTATGAGGACCAGTCCTTCCAGTCCCTGATGCAAATGATAATTGAAACCTCAAAAATTATTAATGGACCCTGGGGCATGattTATGATACCATACCCCTTCTTAGAAGCTTGCCTCTTCCCTTCTGGAAAGCcattgaaaacagaaacaaattaaaggcatttttaCTGATCAAGGTGACTGAGCACAAGGAGACACAGAGAGGAAATGATGGCTCATCCTTTGATGATGGCTTCATGGTGGCCCTGTTGATGGATCTCTTTATTGCCGGAACAGACACCACCTCCACTACTTTCCGCGTGGGCCTTTTGCAGCTCATGGTTCATCCAGATGTGCAA

Function

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process

KEGG:

id description
ko04610 Complement and coagulation cascades

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020410 True 681 mRNA 0.47 5 18104188 18110182

Neighbor

gene id symbol gene type direction distance location
AMCG00020411 NA coding downstream 11684 18089099 ~ 18092504 (-)
AMCG00020404 NA coding downstream 25037 18071296 ~ 18079151 (-)
AMCG00020401 NA coding downstream 48259 18050833 ~ 18055929 (-)
AMCG00020402 NA coding downstream 64202 18029373 ~ 18039986 (-)
AMCG00020400 NA coding downstream 119547 17981395 ~ 17984641 (-)
AMCG00020409 NA coding upstream 61438 18171620 ~ 18175979 (-)
AMCG00020414 NA coding upstream 85558 18195740 ~ 18225630 (-)
AMCG00020417 NA coding upstream 125457 18235639 ~ 18247655 (-)
AMCG00020418 NA coding upstream 137475 18247657 ~ 18291605 (-)
AMCG00020416 NA coding upstream 204489 18314671 ~ 18334032 (-)
G62951 cnot1 non-coding downstream 134497 17968233 ~ 17969691 (-)
G62880 NA non-coding downstream 253075 17848158 ~ 17851113 (-)
G62770 pard6a,LOC108250860,LOC106523998,LOC107101591 non-coding downstream 733742 17364823 ~ 17370446 (-)
G62715 NA non-coding downstream 928353 17120154 ~ 17175835 (-)
G62675 NA non-coding downstream 1084636 17018790 ~ 17019552 (-)
G62981 NA non-coding upstream 27298 18137480 ~ 18138298 (-)
G63015 NA non-coding upstream 73826 18184008 ~ 18186050 (-)
G63057 NA non-coding upstream 247643 18357825 ~ 18358910 (-)
G63092 NA non-coding upstream 287285 18397467 ~ 18398731 (-)
G63096 NA non-coding upstream 326343 18436525 ~ 18436939 (-)
G62961 NA other downstream 64228 18006168 ~ 18039960 (-)
AMCG00020403 NA other downstream 88326 17987181 ~ 18015862 (-)
G62853 necab2 other downstream 477999 17610664 ~ 17626189 (-)
AMCG00020346 nup93,LOC103368977 other downstream 1286421 16794996 ~ 16817767 (-)
G62618 NA other downstream 1311021 16792866 ~ 16793167 (-)
AMCG00020446 cssa11h16orf87,cunh16orf87,clg02h16orf87,zgc:92818,LOC106587296,LOC103043940,LOC107757775 other upstream 2178388 20288570 ~ 20299843 (-)
G63464 NA other upstream 3202020 21312202 ~ 21312605 (-)
AMCG00020471 NA other upstream 4020660 22130842 ~ 22132737 (-)
AMCG00020489 rnf166,LOC106587267,LOC106562062,LOC107685853 other upstream 4330610 22440792 ~ 22466767 (-)
G63679 NA other upstream 4433660 22543842 ~ 22544689 (-)

Expression


Co-expression Network