AMCG00020420


Basic Information

Item Value
gene id AMCG00020420
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 18382143 ~ 18389911 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020420
catttttcttttaaaattggaCGTGTTTCTGTAGGTTGTCTACAAATAGCATTGTGGACTAGCCTGTAATAAGACTtggacatacacacacagatgcacatacAACTTTGGAGGCAGACATGCAGAACTTTAAAACCATTATTTGTATGATTACACTGGCTTCTGTCATTCCGACAAACAATTCTGAAGacgAAGTACTGGAAGGGAATAAGAAAAAATCCATTAACCAGCATGAACAATGTAAAATTGGAACTTCAGGAACTTCTACAGTCAAGGAGCCGGACTGTGTGTATGCTGTGTTTAATGTgacaagagagaaagaaatgtcCTTCTCATATAGCTCATCTCAGCGTAATACGAGTATGAAATACCACTTGCTCAACAACATGGTGATAGGAGTGAATGTCGGGAATGGGAACATCTTAAACCTCACAGACCCAGTGAAGATAATATTCAAGCACAACAATGAGAGCAATAATGGAAACTGTTCATACTGGAGTAGTTCAAAGATTGTTACAAAGAATgGTGTCCCTACTGTGATCGTGGTTACCTGTGCCAGTGTGAACAAGTATGGACAATACAACCTAGGGAGCGATCAGAACCACACCTCAGCGGACATGTGCTGGATTAGTGACAAAACCGTGCACTACATCACAATCATTGGCTACTTCAGCGTGATCGCACTCTTTAACACTGTGATGCTGAGCATTGTTGCAGCAAAGCTGTGCAGGCGGCGACAGAGCAGCCTGCCGCACGAGAGGCGGCAGCAGCTGTGGAAGGACTGTCCGACGGTGCTGGGGCTGAGCTGTGTGCTGGGGTTGCCCTGGGCTTTGGGCTTCTTTGGGTATGGGCCCATGCAGCTCATTATTTTGTACCTCTTCACCATCTTCAATTCCTTTCAGGGTGAGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020420 True 911 mRNA 0.45 6 18382143 18389911

Neighbor

gene id symbol gene type direction distance location
AMCG00020415 NA coding upstream 23298 18338437 ~ 18358845 (+)
AMCG00020413 LOC107596504,LOC108411466,LOC107753522 coding upstream 186513 18187199 ~ 18195630 (+)
AMCG00020412 LOC107707912 coding upstream 196095 18182076 ~ 18186048 (+)
AMCG00020405 elmo3,LOC106561448,LOC105018213,LOC107732817,LOC107665726 coding upstream 204023 18138887 ~ 18178120 (+)
AMCG00020406 e2f4,LOC106573204 coding upstream 247331 18119713 ~ 18134812 (+)
AMCG00020419 NA coding downstream 5946 18395857 ~ 18398731 (+)
AMCG00020425 ccdc102a,LOC106562045,LOC107594240,LOC107081377,LOC103376291 coding downstream 120552 18510463 ~ 18522856 (+)
AMCG00020426 ccdc102a,LOC106587147,LOC106562045,LOC107674431,LOC107754670 coding downstream 140267 18530178 ~ 18536093 (+)
AMCG00020427 LOC106562068,LOC107585958,LOC106903279,LOC106941941 coding downstream 219858 18609769 ~ 18617672 (+)
AMCG00020428 vac14 coding downstream 236057 18625968 ~ 18668640 (+)
G63058 NA non-coding upstream 21650 18360275 ~ 18360493 (+)
G62994 NA non-coding upstream 171114 18210769 ~ 18211029 (+)
G62993 NA non-coding upstream 171766 18210138 ~ 18210377 (+)
G62992 NA non-coding upstream 173493 18208411 ~ 18208650 (+)
G62991 NA non-coding upstream 176173 18204960 ~ 18205970 (+)
G63068 NA non-coding downstream 3155 18393066 ~ 18393306 (+)
G63069 NA non-coding downstream 4190 18394101 ~ 18394306 (+)
G63097 NA non-coding downstream 48291 18438202 ~ 18440919 (+)
G63203 LOC101154678 non-coding downstream 893047 19282958 ~ 19283173 (+)
G63208 NA non-coding downstream 936684 19326595 ~ 19329495 (+)
G63045 NA other upstream 48111 18332569 ~ 18334032 (+)
AMCG00020407 NA other upstream 310092 18067787 ~ 18072051 (+)
AMCG00020408 NA other upstream 316354 18058558 ~ 18065789 (+)
G62895 NA other upstream 453239 17928328 ~ 17928904 (+)
AMCG00020371 nutf2 other upstream 910274 17459144 ~ 17471869 (+)
AMCG00020439 LOC107696663,LOC107556242,LOC107746488,LOC107726063 other downstream 1207292 19597203 ~ 19602324 (+)
AMCG00020438 NA other downstream 1241414 19631325 ~ 19636221 (+)
AMCG00020470 NA other downstream 3745457 22135368 ~ 22142198 (+)
AMCG00020487 NA other downstream 3966263 22356174 ~ 22409493 (+)
AMCG00020505 NA other downstream 4663887 23053798 ~ 23062149 (+)

Expression


Co-expression Network