AMCG00020421


Basic Information

Item Value
gene id AMCG00020421
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 18419182 ~ 18431255 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020421
CGCGCAGAGCCGCAGAGCCCAGCAGCGCGGAGACTGGCAGGCTGACCTCGGGAAACCTGCTTTTCTCCACCCGTCAAGTGCCCTAGATATGAGAATGGCCCAGCCTAGCCCCCTGCCTACAATCCCTGAGCATGATGTAATGAAGATGGTTCTGACTCGCACCAGTGCAGGCTCCTGTCTCAGAGGCAGCTATAGCAGAGCAGGGGGGTGCCAGGTGGCTGTGAAAGTGCTGTCCATCCAAAGAACTGCGGAGAGCCAGTGGAGTGAGAGCCTGAAGGAGATTGCGAAGGTCAGACGGATTCAGTCAGAGAGGGTCCTGGTTCCCCTGGGTGTGTACAGGTCTCATCTGCTCCTAGGCCTGGTGTCAGACTGGATGGACGAGGGCTCTCTTCACTCTCTTCTGTATGAGCGGCAACAGCACCAAGAGGTGCCCTGTACCCTGCTCCTCCGTATCATGCAAGATGTGGCGGAAGGACTGTCCCACCTGCACAGCCTGCTCCTTGCCCATCAGGCCCTAAAGCCTGCCAATGTGCTGCTCGATGCCCAGTACCGTGCCAAGGTGTGTGACTTTGGCCTGTCTCAGTGGAAGAAATGGAACCTAAAGTCTGTCCCTGCTGATTGTAATGGGCTTTGCATTAGGGACCTAGTGTATTTGTCCCCAGAGACCCTTTGTGGGGAGAAACCTTCGACAGAGGGAGATATATACAGTTTTGCCATGCTCTTGTGGGAGACCCTCAACAGAAGACCACCATATGAAGATATCTCTCAGCCTCAGGTTCTGCTGCTGTCGGTGCAGAGTGGTGTGGGACCGGGCATCGGGGAGGAGCTGGTGCCACGTGCCGTAACCCAGGCTCCCGTCCTCTCCCAGCTCATCGTCCACTGCTGGAGCTATGAGCCTCACACGCGCCCTCAGGCATCAGACTGTGTGCTGGCGTTACGGAGAGTCTTGGAGACAGTTGACCCAGACGCAGTGGCCAGGGCTGCTGTCCAGCTGAAGGAGAATAAGGAGAGGGTGCTCTTGTACAGTAAAGAGCAGTTGATTCAGGACCTGCATGTGGAGGTGAACAACCTGGAGCTGTCTGGCTGCTGCTGTGAGTCCAAAAGTGCTGGCACCAAGTCTGTTCGCTTGGAGACGGTGCAGATGTTGACCTCCGTACCAGAAAGACCCAATCCTGCCCGGACCTCTTCCCGAAAACCCAACGGCCCTTCACCCCCCCTGCCAGTTCCCGGTGCCCTCCAGACTGCTTGTAGAATAGACTCCTGGAGCCCACCCTGCGCTTCTCCCCTGCAGCCAGCATGTCGAGTCGCTCGGGTATCACCAAGCAGGCCAAGTAGTTTGAACAGGGGTAATTTGCGGTATagcccacctcctcctccaccctctCCACCCACTGGCACTGCCCGACTGCACCGAAGTGTCTCCTGTGACCAACCCCAGCACTGCTCCTTGGACTCCCTCCCAGGGAAGAGCTGCTGCCAGATCCTGCAGGACTACCGGGAGTCCATCTTGCGAGGGATGACAGAGGGCCGGCTGAACTACATCCTGGATGTGCTGCGCTCCCGACAGGCCCTGACACGGGAGGCCTACGAGCTCATCACCGCCGCCCAGACGCTGGTGGCTCGCACACGCTGCCTGCTGGACACCTGCGTGTGTCTGGGGGAGGGGGCGGCCGGGTTAGTTGCCATGGCCCTCGGTCTGGTGTCCACGAGCGCCCGCCGCAGCCCCTCCCAGCTCTCCTATTGAGGGTACCATTCCCAGTGAGCCTCCGAGGGGAACTACCAGTGGAGAGTCACGTCACCGAGACGGCAGAGCTTGCTACTTTCTGTGCACGGTGGCTGGTGGAGCTGAAAACATGAAGACGGTGGCTGCCGACCGCCAGTAAATTCATATTGGTCTTCAACGTTTTCGTCACAGGGCAGCTTTTCAAACGGATCACCCAATCTGAAGAAGAGTGATTGAGAGGAATAGCTGTGTTAAGGTGGATGCCAGTTGGACCGTTATAGCAGATGTGGGAGTTGTTGTATCCAGTGGGTGTGGATGCAGCCATTTAGCTACCATATGTATGGGTCATGTGGACCCCTGCCTTTCAAATGAGTATTTTATggttataaattaaatactgtattatcaACTCAGATTTTGTAGTTTTCATAAAACtatttgcactgtattgtttattatactCCTGACaggtgtgcatgtgtttgtctcCATCACAATGATATGGAAGTTCTCAGATTCAATGCAGCAGGGCACAGAGTGATGTATGTATACTGTAGCAGTGCTCTGATTTGCTTTTTTGCTGTAGTTAAAGAGCGTGGTGTTTTCCTTGTTAGAGGAAATGGTTATGACCTATTATCATCTGTTTTTTGAAGGAATGTAAGTtattcattttgatttgcattttcacAAAATTGAAATCGTATGTAATCTCTAAAACTGCAGTGTAGCAGGATTGATATTTCATTATTCAAGTTGTAATACATAAGGCATGTGGTTTTTATATTCTGCACCCTTTGTACAGAGGCAGTTCAATGGGATCAACATAGCAGATCAGTAAGTATATTAGCTTTGCATGAGttttgaaaatcttttttttagtGCTGAATGTTGGTATCTTGCATCAAGAACTAAAGTACTGCtgctattttttatattgaaattaatatagAAATCTTTCTTTATTAGTGTGATAACatagtgttttacatttaaaaaactttgTTGTAAGAAAATCTATTATAAAAgtatatactgaaaaatatgtgTTGTCTAGTGTTTTCAATGTAACAAATAGCCAGGATCAAATCCTCCCTCACCACTGACAGGGTTCCCTCTAAAAGTTTAAGACAGATAAACATCTAAAGGTTGAAATCTTGTAtcctatggcaagccaaattatcatt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020421 True 2907 mRNA 0.50 12 18419182 18431255

Neighbor

gene id symbol gene type direction distance location
AMCG00020424 NA coding downstream 3412 18398834 ~ 18415770 (-)
AMCG00020422 NA coding downstream 23886 18390806 ~ 18395296 (-)
AMCG00020416 NA coding downstream 85150 18314671 ~ 18334032 (-)
AMCG00020418 NA coding downstream 127577 18247657 ~ 18291605 (-)
AMCG00020417 NA coding downstream 171527 18235639 ~ 18247655 (-)
AMCG00020423 NA coding upstream 6949 18438204 ~ 18454657 (-)
AMCG00020434 NA coding upstream 443647 18874902 ~ 18901561 (-)
AMCG00020433 NA coding upstream 477723 18908978 ~ 18915511 (-)
AMCG00020437 NA coding upstream 883540 19314795 ~ 19316145 (-)
AMCG00020435 LOC107556245,LOC106562015 coding upstream 892140 19323395 ~ 19438437 (-)
G63092 NA non-coding downstream 20451 18397467 ~ 18398731 (-)
G63057 NA non-coding downstream 60272 18357825 ~ 18358910 (-)
G63015 NA non-coding downstream 233132 18184008 ~ 18186050 (-)
G62981 NA non-coding downstream 280884 18137480 ~ 18138298 (-)
G62951 cnot1 non-coding downstream 449491 17968233 ~ 17969691 (-)
G63096 NA non-coding upstream 5270 18436525 ~ 18436939 (-)
G63180 NA non-coding upstream 646222 19077477 ~ 19077758 (-)
G63257 NA non-coding upstream 1203039 19634294 ~ 19636243 (-)
G63346 NA non-coding upstream 1824667 20255922 ~ 20256399 (-)
G63447 NA non-coding upstream 2652007 21083262 ~ 21083461 (-)
G62961 NA other downstream 379222 18006168 ~ 18039960 (-)
AMCG00020403 NA other downstream 403320 17987181 ~ 18015862 (-)
G62853 necab2 other downstream 792993 17610664 ~ 17626189 (-)
AMCG00020346 nup93,LOC103368977 other downstream 1601415 16794996 ~ 16817767 (-)
G62618 NA other downstream 1626015 16792866 ~ 16793167 (-)
AMCG00020446 cssa11h16orf87,cunh16orf87,clg02h16orf87,zgc:92818,LOC106587296,LOC103043940,LOC107757775 other upstream 1857315 20288570 ~ 20299843 (-)
G63464 NA other upstream 2880947 21312202 ~ 21312605 (-)
AMCG00020471 NA other upstream 3699587 22130842 ~ 22132737 (-)
AMCG00020489 rnf166,LOC106587267,LOC106562062,LOC107685853 other upstream 4009537 22440792 ~ 22466767 (-)
G63679 NA other upstream 4112587 22543842 ~ 22544689 (-)

Expression


Co-expression Network