AMCG00020441


Basic Information

Item Value
gene id AMCG00020441
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 19590667 ~ 19596696 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020441
GCAAAGCAACATGTAAGTCATTCTTTCAATAAATGCCGATCTCCCAAGTTTTCACGTCATTATACGTTTATTGTTTGCAGCAAATTGTTTTACTTGTAAGGTATCGATGGCAGGAGGGAAATAAACGGACGTGGCGCGCCAGGTTTTTAAATGACCCGCTCTGCCTGCCCCTTCGTCTACGGCGAGACTACAGGCACTTTATAAGGATGAGGCGCAAAACTCGCCGCGCCAGCTCAGTATAGCAATCGGCAGCTACCCAAGAGGAACACGTCCTGAAGCTGCTGGCACAATAAAAGGCCGACAATATTCATCCTGCACCCCAAAGCCAAGGATCATGCTCGGTATATCCAAATGAACTGACAGAAGCAGTTGGGagttgttctttatttatgaagtgtAGCTTCTAAGGAGAGGATCTGTAAAGGTTAACATTTCCAGTGTAAAGGATTCCCCCGAGGATACAATGCCAAGGAAAGGGTTAAAGAAAGAGTTGCCCATACAGACTACTACAAGCGATGAAGTGACCAAAGAAACCATTGCCACACGCTccaggaaaagaaaagcaaatgttgCCATTTATTTGCCGGATCCGGACGAAGATGTTCTGGAAATGACTAATAAGAAGCAATATGAAAATCAGACCGTCTGGAATCACACAAGTCCATGCAGGCTGATTCACACACCCGACAGAGAAGTAGATGAACCAGTTAAATTGGACAGTGTTGCCTGTGCGCAGTATATGTTAAAGAATATCTTTGTCACACCTACAAGATCCTCCCCACTTCCAGTCCTATGTTGGGCTAATAAAGATGACGTGTGGAACAACCTtctgaaaaaagacaaaacgtACCCACGGGATAATCGATTTCTGGAGAGGCATCCACACCTCCAACCAAAAATGAGGGCCATACTTCTTGACTGGCTAATGGagGTCTGTGAGGTGTACAAGCTGCACAGAGAGACGTTTTACTTGGCACAGGATTTCTTTGACCGATTTATGGCGACACAGATGAACGTTGTCAAAACAAGATTACAACTTATTGGCATTTCCTCTCTCTTTATTGCTGCCAAGCTGGAGGAAATCTATCCTCCCAAGCTGCACCAGTTTGCCTATGTTACAGATGGCGCTTGTACAGAGGATGAAATTCTGGATATGGAACTGATCATAATGAAGcTGATAGATCTGTGCACCTTAGATGTTCGATGCCTAGACTTCTCCTATGGGGTGCTGGCCGCCTCTGCCTTATTTCACTTCTCCTCACTCGAACTGGTGCAGAAGGTTTCAGgCTTTCAGTGGCAAGACCTTGAAAAGTGTGTGAAGTGGATGGTTCCGTTCGCCGTATCCATTAGGGAAGTGGGAAGCTCAGAAATGAAGACCTTCAAGGGGATATCGGCAGATGATATGCACAACATCCAGACCCACCCGCCTTTCCTGGAGACGCTGGACAAAGCTTATGCTTATCAGGCTGTAGAGTCGGAGCAGAACCAGAGGTCTCCAGTGCCTTCGGGGGTTCTCACCCCACCTCCGAGCAGTGAAAAACCAGAACCGTCAAAATCTTGAATGGTGTGGGATCCAGTTTACTCCTCAACATTAGGAAAGTTTCATTGGACATCTTGGTTGGTGTTGTGGGATGAAATTAAGCATTACTGATcacttgatttttaaatgctacATAAGGCACCTGTGTATGTGTGGAATTGAATTGCTAGGTGgagtttttttaagtttttttgtaaattgacaTTTTAGTTGAGAAGATGCCAAGTCCATTACCTGCCAAATATTGAGAGCTCTGTGTGCTCTGAATGCTGCTACATAAGGTGAGACTTGGGATAGTAAATGCCTTGACTGGGTGTTCTGCGTATGGCCCACACTGCCATTCATTGCCTTTTGGAGGCTTGATCTCCACTGCCAGATTAGACATTTGGGACCAAATGTGCGTGCTAAGGGGACCAGAGGAAAAACCAGCTTGATaagcaaaatattttcacaataagGTATTCAACCTCTTTTTACTGCTCAGAGTATTGGTTTACCAAattctaaatgtttttaatgatacaATGCTGCTACCTTCCtgtatatcatatttttaaataaagatactGTCTTGgacagttttatgttttatactgTCCTGTTCATGAATTATCTTCTCTATGGTTCTCTATGTCATGGATGCTCTTGATCAGGTGCAAGTTTTCACTGCTATGTCATCATGTAACTTGAAGGACATCTTTTACTGCTAATTTGTTTTAACGTGGAGGACTAGGGTCGGGGGTGGTCATCACGGTAATGTACTGAATTGCTTTTTATGTACCTAATAGTTAAAAGAACAATGTTTTGCTCTATATACATGGCACTATCTATATAATGTGCTGCAAAAGCATCGCCCTCTTTCCCTCATCTATCTGCCTGGCAGGAGATTAAATGTAGACGGGCCAGAGTCCTAGAACCTCTACTGCAAGCTCATTGATAACATTACTGTAATCTTAAAAGTTTGGGTGTCGACCAGCAAGTGAATGCTTTGAGCCCCCTCTTCCTGTCATGTCAATCATGGTATCATGTGATTGTTGCAAACTATATGCACTTTTGTACTATACCACATTATgatttaatgtgttgttttatcaattaaaagTCCTCTGTGCTTGCTGAAAAGATGTCAACATTGGGTTTTTAGGCATTGCTGACATGAGTTTGTACAGGTGTTTTCATGATTAACTTTTTACATGAGCGAACATGCTTGTACCAAATGCATACTGGAGTAGATAAAGATAACATACTTTCTTGCAACCCTTTTAGTAACCCTTTATTGAGCTTAAACATCCTTGCTCatgtgtgaaatgtatctaaTCAATACATGCAATGCAAGTAATTGAACATGGTATGAAGGTTGTGTCCACCCAAGCTCACCTATGCCACACAACAgaatatttacaatacaaa

Function

GO:

id name namespace
GO:0051726 regulation of cell cycle biological_process
GO:0016310 phosphorylation biological_process
GO:0016301 kinase activity molecular_function

KEGG:

id description
K06626 CCNE; G1/S-specific cyclin-E1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020441 True 2950 mRNA 0.42 11 19590667 19596696

Neighbor

gene id symbol gene type direction distance location
AMCG00020440 NA coding downstream 19827 19552958 ~ 19570840 (-)
AMCG00020435 LOC107556245,LOC106562015 coding downstream 152230 19323395 ~ 19438437 (-)
AMCG00020437 NA coding downstream 274522 19314795 ~ 19316145 (-)
AMCG00020433 NA coding downstream 675156 18908978 ~ 18915511 (-)
AMCG00020434 NA coding downstream 689106 18874902 ~ 18901561 (-)
AMCG00020455 NA coding upstream 4246 19600942 ~ 19606909 (-)
AMCG00020457 NA coding upstream 26489 19623185 ~ 19626136 (-)
AMCG00020456 NA coding upstream 48998 19645694 ~ 19646512 (-)
AMCG00020450 LOC104957704 coding upstream 56127 19652823 ~ 19656766 (-)
AMCG00020448 NA coding upstream 92677 19689373 ~ 19692675 (-)
G63180 NA non-coding downstream 512909 19077477 ~ 19077758 (-)
G63096 NA non-coding downstream 1153728 18436525 ~ 18436939 (-)
G63092 NA non-coding downstream 1191936 18397467 ~ 18398731 (-)
G63057 NA non-coding downstream 1231757 18357825 ~ 18358910 (-)
G63015 NA non-coding downstream 1404617 18184008 ~ 18186050 (-)
G63257 NA non-coding upstream 37598 19634294 ~ 19636243 (-)
G63346 NA non-coding upstream 659226 20255922 ~ 20256399 (-)
G63447 NA non-coding upstream 1486566 21083262 ~ 21083461 (-)
G63628 NA non-coding upstream 2785668 22382364 ~ 22384918 (-)
G63629 NA non-coding upstream 2786821 22383517 ~ 22391215 (-)
G62961 NA other downstream 1550707 18006168 ~ 18039960 (-)
AMCG00020403 NA other downstream 1574805 17987181 ~ 18015862 (-)
G62853 necab2 other downstream 1964478 17610664 ~ 17626189 (-)
AMCG00020346 nup93,LOC103368977 other downstream 2772900 16794996 ~ 16817767 (-)
G62618 NA other downstream 2797500 16792866 ~ 16793167 (-)
AMCG00020446 cssa11h16orf87,cunh16orf87,clg02h16orf87,zgc:92818,LOC106587296,LOC103043940,LOC107757775 other upstream 691874 20288570 ~ 20299843 (-)
G63464 NA other upstream 1715506 21312202 ~ 21312605 (-)
AMCG00020471 NA other upstream 2534146 22130842 ~ 22132737 (-)
AMCG00020489 rnf166,LOC106587267,LOC106562062,LOC107685853 other upstream 2844096 22440792 ~ 22466767 (-)
G63679 NA other upstream 2947146 22543842 ~ 22544689 (-)

Expression


Co-expression Network