Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00020443 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030127.1 |
| NCBI id | CM030127.1 |
| chromosome length | 42978078 |
| location | 20235596 ~ 20237641 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0007186 | G protein-coupled receptor signaling pathway | biological_process |
| GO:0001505 | regulation of neurotransmitter levels | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0004969 | histamine receptor activity | molecular_function |
| id | description |
|---|---|
| K04151 | HRH3; histamine receptor H3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00020443 | True | 1377 | mRNA | 0.50 | 3 | 20235596 | 20237641 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00020442 | LOC106562006,LOC107565776,LOC105924362,LOC107741896 | coding | upstream | 403517 | 19826809 ~ 19832079 (+) |
| AMCG00020436 | tshz3,LOC107696607 | coding | upstream | 1062211 | 19169312 ~ 19173385 (+) |
| AMCG00020431 | NA | coding | upstream | 1372323 | 18783271 ~ 18863273 (+) |
| AMCG00020432 | NA | coding | upstream | 1466171 | 18765518 ~ 18769425 (+) |
| AMCG00020429 | LOC106562044,LOC106587150 | coding | upstream | 1507627 | 18707806 ~ 18727969 (+) |
| AMCG00020445 | NA | coding | downstream | 18136 | 20255777 ~ 20260661 (+) |
| AMCG00020444 | NA | coding | downstream | 62372 | 20300013 ~ 20310689 (+) |
| AMCG00020458 | phkb,LOC107591034,LOC107723134,LOC107757780,LOC107598686 | coding | downstream | 229747 | 20467388 ~ 20489997 (+) |
| AMCG00020459 | phkb | coding | downstream | 263850 | 20501491 ~ 20526222 (+) |
| AMCG00020460 | NA | coding | downstream | 397225 | 20634866 ~ 20658252 (+) |
| G63318 | NA | non-coding | upstream | 38169 | 20197177 ~ 20197427 (+) |
| G63313 | NA | non-coding | upstream | 367314 | 19867785 ~ 19868282 (+) |
| G63259 | NA | non-coding | upstream | 581324 | 19653224 ~ 19654272 (+) |
| G63248 | NA | non-coding | upstream | 605029 | 19630274 ~ 19630567 (+) |
| G63209 | NA | non-coding | upstream | 872112 | 19361872 ~ 19363484 (+) |
| G63328 | NA | non-coding | downstream | 1189 | 20238830 ~ 20240926 (+) |
| G63334 | vps35,LOC107659455,LOC107598694 | non-coding | downstream | 11191 | 20248832 ~ 20251957 (+) |
| G63360 | NA | non-coding | downstream | 74058 | 20311699 ~ 20313272 (+) |
| G63433 | NA | non-coding | downstream | 326176 | 20563817 ~ 20580433 (+) |
| G63448 | NA | non-coding | downstream | 846476 | 21084117 ~ 21084538 (+) |
| AMCG00020438 | NA | other | upstream | 599375 | 19631325 ~ 19636221 (+) |
| AMCG00020439 | LOC107696663,LOC107556242,LOC107746488,LOC107726063 | other | upstream | 633272 | 19597203 ~ 19602324 (+) |
| G63045 | NA | other | upstream | 1901564 | 18332569 ~ 18334032 (+) |
| AMCG00020407 | NA | other | upstream | 2163545 | 18067787 ~ 18072051 (+) |
| AMCG00020408 | NA | other | upstream | 2169807 | 18058558 ~ 18065789 (+) |
| AMCG00020470 | NA | other | downstream | 1897727 | 22135368 ~ 22142198 (+) |
| AMCG00020487 | NA | other | downstream | 2118533 | 22356174 ~ 22409493 (+) |
| AMCG00020505 | NA | other | downstream | 2816157 | 23053798 ~ 23062149 (+) |
| G63786 | znf821,LOC107747380 | other | downstream | 2832770 | 23070411 ~ 23074945 (+) |
| AMCG00020529 | LOC107090538 | other | downstream | 3795396 | 24033037 ~ 24068457 (+) |
