AMCG00020445


Basic Information

Item Value
gene id AMCG00020445
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 20255777 ~ 20260661 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020445
CACGTTAGAGACGTCGCAATTCGAAAACGTCACAACATCAATCCACTGGCGGTCGCGTTCTtttagcgcagatgtccgcagtcctgcgcagatctgcagactCTCAtccatcccattggtggagcagcgcacatctgcggaaatctgcactacacGAACACGGCCGAGTGACTATGGGGGGTGTGTTTATAAAATTTAGCGCGAAAGTGCAGCACGTCTTGTAGTGTGCTTTGCAGGGGTGGTTTATGCAACAACGCAATCgttagatgtatttatttattttgtatactgtCATTAATCTTGGCGTTTAAACTGGTAATGGAGCAAGATTTGATTAAAAAGTTAGCATCCAAACTGGGTATAACTTCATCGAGAATACTGAATAAAACCGAGGAGTATCTTCGGCTGTCCCAGGTCAAATGCACCGGACTGGCCTCCCATACGACAGCAATAAGCAAGACAGTTATGTGTTTGGAGCTGGCTGCAATGTCGATGAAACAACCGCTAGATAAAGAGTATGTTATCAAACTGTCTGGACTGAACAAGAAGACGTATCAGAGCCATCTCAAGTCCATGgagtgcatgctgggactggAAACTCAAACGGGCATCCGAGACCTGGCCGTGCAATACTGCTGCACCGAGGCCGTGTCTGCAGCAGCAAAGATCCTGCAGAGatATGAAGCCAGTCTACCTGAAGCACAGCAGAACGACCTTGATTTATCAAAGCCACTCTTCACAACGGCAGCATTGTATACAGCATGCAAatgtaTGAAAATCAAAGTTGACAAGAAGTTGAGCACCATGTCCGGTGCCAAGAAAAGCATATTTGACAGACTGTGTACCCAGCTGGAGAAATTCGGAATACAGATTTGCAAGGAAGAGACATTAACTTCTCACAAGCAACAGAAGAGTGACTCAGACAAATCTGTTAAAGAGGATTATGAAGAATGGAAAAGAAAGATTCTGGAAAATGCATTGAAAGCCCAGAAAACAGACACCTAATTTTTAATCTATTCAACTAATTTATAGGTTGTTTTAagttatggttttatttagtcTCTAATTTATATACTTCAACTTCTTCTTTTCAATTCATCAATTTTTAATATGGTTCATTCCTATATGGTTACTAATTGTGTGAAGTGAGACATTCGATTTTCATTTAGTGATCAAAGCCACTTTGCTTCACTGTGTTTGTTACATTGTGAAGTGTTATTTCTCTATTATAATGTTGCACCCCCTTGTGGCTATAGGAAGATGACAGATTTTTTTAGAATAATATAATGGTTTTCTACATCAATACAATACTTTAACCAGAAAAGACAGTATAGAAATTGGcatagtatattttattttcacaattctttacttttaatcataataaaattgTTGTATTggtcttaaatgtttttgttgtctttaatatatattaaatatatatattgttttcatgagGGTAAATAATGTCTTCAAGATGTATCAAAATCTGTATCAAATACTTAATTTCCAATGCAAACTTTTTGTTCCTTAATGCAgaggtttgttttattctcggcataaaactaaatattctcagggcatttattttcaaaaggtttaaaaacacaatacattggTAGCCGTATTAATTAGTACTTATCGTAGAAGCGGAAGGAGAGAAAACTGTCTAAATTACAGCTGCCTTCACAGAAGGTTATAATATGTATACACAATACTGTGTGGCTCCCAGttgcagaaatacaaa

Function

GO: NA

KEGG:

id description
K02608 ORC6; origin recognition complex subunit 6

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020445 True 1747 mRNA 0.38 6 20255777 20260661

Neighbor

gene id symbol gene type direction distance location
AMCG00020443 NA coding upstream 18136 20235596 ~ 20237641 (+)
AMCG00020442 LOC106562006,LOC107565776,LOC105924362,LOC107741896 coding upstream 423698 19826809 ~ 19832079 (+)
AMCG00020436 tshz3,LOC107696607 coding upstream 1082392 19169312 ~ 19173385 (+)
AMCG00020431 NA coding upstream 1392504 18783271 ~ 18863273 (+)
AMCG00020432 NA coding upstream 1486352 18765518 ~ 18769425 (+)
AMCG00020444 NA coding downstream 39352 20300013 ~ 20310689 (+)
AMCG00020458 phkb,LOC107591034,LOC107723134,LOC107757780,LOC107598686 coding downstream 206727 20467388 ~ 20489997 (+)
AMCG00020459 phkb coding downstream 240830 20501491 ~ 20526222 (+)
AMCG00020460 NA coding downstream 374205 20634866 ~ 20658252 (+)
AMCG00020461 NA coding downstream 401012 20661673 ~ 20672190 (+)
G63334 vps35,LOC107659455,LOC107598694 non-coding upstream 3820 20248832 ~ 20251957 (+)
G63328 NA non-coding upstream 14851 20238830 ~ 20240926 (+)
G63318 NA non-coding upstream 58350 20197177 ~ 20197427 (+)
G63313 NA non-coding upstream 387495 19867785 ~ 19868282 (+)
G63259 NA non-coding upstream 601505 19653224 ~ 19654272 (+)
G63360 NA non-coding downstream 51038 20311699 ~ 20313272 (+)
G63433 NA non-coding downstream 303156 20563817 ~ 20580433 (+)
G63448 NA non-coding downstream 823456 21084117 ~ 21084538 (+)
G63477 NA non-coding downstream 1378335 21638996 ~ 21639656 (+)
G63562 NA non-coding downstream 1947047 22207708 ~ 22208031 (+)
AMCG00020438 NA other upstream 619556 19631325 ~ 19636221 (+)
AMCG00020439 LOC107696663,LOC107556242,LOC107746488,LOC107726063 other upstream 653453 19597203 ~ 19602324 (+)
G63045 NA other upstream 1921745 18332569 ~ 18334032 (+)
AMCG00020407 NA other upstream 2183726 18067787 ~ 18072051 (+)
AMCG00020408 NA other upstream 2189988 18058558 ~ 18065789 (+)
AMCG00020470 NA other downstream 1874707 22135368 ~ 22142198 (+)
AMCG00020487 NA other downstream 2095513 22356174 ~ 22409493 (+)
AMCG00020505 NA other downstream 2793137 23053798 ~ 23062149 (+)
G63786 znf821,LOC107747380 other downstream 2809750 23070411 ~ 23074945 (+)
AMCG00020529 LOC107090538 other downstream 3772376 24033037 ~ 24068457 (+)

Expression


Co-expression Network