AMCG00020454 (mylk3,LOC107598691,LOC107659456,LOC107742117)


Basic Information

Item Value
gene id AMCG00020454
gene name mylk3,LOC107598691,LOC107659456,LOC107742117
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 20263295 ~ 20276469 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020454
AAAAAACGGAACAAGTGGGAGATAACATATCAAAGCAGAGGTGTTTATTTAAGTGGTGTCATGCTACTGGCACAAAGAGATCAGTCCCGACTCAACTGATTTGTTGCATGAAGAACTTTGACACCCAGAGGGctgaaaatacatgaaaaaaaaataaagacataggTAAAGGACAGTTAATGGTATAGTGAGAGGTAGACATCTTGCTTCTCTCATTCGTCTATTGAATTTCAGTGCTTTTGGTTTGTTACAGCCTGGAAAAATGAGTAAACCAGTGTCTTTAGCCGCTTGCATCGCTAAAATGTATGAAGGGGGGAGGCGGGATAGTGCGGGGAGTTCAGGAGCAGGGACTCCGGTCAAAAAGCCCAACAGCAGTGTAATCAACAACTTAAGCTCCATGGACATCAAACTGAACCTTCTGGATGCAAAAGTGGAGAAGATTGTGAACAGCCAAGGAGAGGTCTTGAAGAAACTAGATGTAGTTTATCAAGGCATTGGTGACCTGGGAAAGGACATGGCCAGACTGAAGTTATCAAATGAGCCCAGCATTGCTGAGGAGAATACCAAAAAGTGTGACTCTGCTCCATTTTCTGAGATCAAAGCTCTGTGCAGTGAATCTGTGAAGCTGTTGAAATCTCTGCAACAggacagcaaaaaacaaaaggagaaaatTGATGGCATTGAGCTCTCATTCTCTGTCGTAGACAAAGTAATTAAGTTTGTGGGTGAAACATTCAAACGCTCAGAAATAGTGGAGTATATCCTCAGGGGCACTGTGCCCTGGAGGAAAGACAGTCTTCTCGAGAGTAACGAAGAGaAACCAGACAAAACAGAGGAAAGAGGTGCAAAACCCAAAGCTAGATTCTGCAATCGAGCAATTCAGGCTGAGACCAGGATATCTTTGGAAGATGACAGGGGAAAGGAGAAAGCCCTCAGCAAACCAGTGGAAAGAGCAAATATAGATTGTACCACACCAACTCAGACACCCTGCCAAGCAGTGAAGGATTCAACTAGTCTTGGGGCCCAGGCGACAAACCAAACAAGTGGTCCAGAGAATGCAGACGATTTGCATCCCTTACCAGTACTGGACAAGCCTTCCATTTACAATTCCGGAAATAAACCATCCTGTAAACTCAAGGAAGTTTCCAACCAAAAAAGAGAACCCATACAAACTCAGACCTTGATTAAAGACACTCAAAACATTGGGTTGAACACAGAGGACCAGTATGGGACTGAAGAGGCTGAAGGCGGCCACATCTGTGCAGTAGCTGGAGGATCTGAAAGAGATGTATCTGCAGCAACTGAAAATGGACGCCATAAGTCTGCAGCAACAGCTCTGGAGAGAATCCTTGACACACCCGAGGGCAGCCCTGATACAGGATTACAAATTCTGGAAGCTTCCGACGATGAAACACTTCAAGCATCGCCATTCTCCGTTCAACCACAGCAACCCGCTGTGgaggacaagaagaagaagaagaacaccAGAGAGCGACGTAAATCCTCAAAAAGTTCTGTGCCTTTACCAAAACACAAGGAAGCTGAGTGTAAGCCACATGTTAAAGTTGTTGTTGCCGTGCAGAAGACGGTGTCTCCAGCCAAACAGCAGGAGGAACAAAACGCCCCGCAGGCATTCAGTGCCAGTGGACTGCAGAAAGACAACAGCACGACCATAGAAATTAAGGCTGAAAAACTGCCAAGTCAGCCCCAAAGTGAGCCAATGCAGCTTCTACCCGCGGGTACACATCAAACTGAACCCGACAAGCTGGGTGAGAAGCTGGGTGAGAAACCTGAGGCAGCAGACAACACTGAGATACAAGCCAATAAGGAGACCACTGGGACTAATCCACCAGCTGTAGCAAAGTCTCCAGAGCCCCAGCTAGTTGTCATTGATGACAGCCCTCCCTTGCCTGCACCTTTTGAACATCGCATTGTAAATGCAAAGCAGCTTCCAGTTAACTCGTATTACACGGTGAAACAAAATGAAGTGCTAGGAGGGGGACGTTTTGGACAGGTTCTCAAGTGTGCAGAGCTTTCATCTGGACTCACACTGGCTGCCAAGATAATAAAAGTTAAAGGCTCAAAGGATAGGGAAGAAGTCAAGAACGAAATTGGTGTCATGAACCAGTTAAATCATGTCAATTTGATCCAACTCTATGATGCCTTTGAATCCCGGAACAACCTCACATTAATCATGGAGTAtgTGGAGGGAGGAGAATTATTTGACAGAATCATTGATGAGAATTATCAACTCACCGAACTGGATGCCATTGTGTTCACACGGCAGATCTGTGAGGGAGTGCAGTATCTGCACCAGCAGTATATACTCCACTTAGACCTCAAGcctgaaaatattttgtgtgtaaaccatacaggaaatcaaatcaaaataattgactTCGGACTTGCGAGAAAGTACAAACCTCGCGAGAAGCTGAAAGTTAACTTTGGCACACCAGAGTTTCTAGCACCAGAAGTGGTGAACTACGATTATGTTTCCTTCCCTACTGATATGTGGAGTGTGGGAGTCATCACATACATGCTGCTCAGTGGGCTTTCTCCTTTCCTGGGAGATAATGACACAGAGACCATGAACAACATCCTCCATAGTAACTGGGAGTTTGACGTggatgcttttgaaaatgtctcCGCTGAGGCCAAAGACTTCATTTCAAGGCTGTTGATCCCAGAGAGATGGTATTATGCCTTTCCCTCTTTGTACTAG

Function

symbol description
mylk3 Predicted to enable myosin light chain kinase activity. Involved in ventricular cardiac myofibril assembly. Acts upstream of or within heart morphogenesis and sarcomerogenesis. Predicted to be located in cytoplasm. Is expressed in lens; notochord; pericardial region; and somite. Orthologous to human MYLK3 (myosin light chain kinase 3).

NR:

description
PREDICTED: myosin light chain kinase 3-like isoform X1

GO: NA

KEGG:

id description
K00907 MYLK; myosin-light-chain kinase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020454 True 2725 mRNA 0.45 11 20263295 20276469

Neighbor

gene id symbol gene type direction distance location
AMCG00020447 vps35 coding downstream 8079 20238327 ~ 20255216 (-)
AMCG00020449 NA coding downstream 37018 20215104 ~ 20226277 (-)
AMCG00020453 NA coding downstream 556088 19706484 ~ 19707207 (-)
AMCG00020448 NA coding downstream 570620 19689373 ~ 19692675 (-)
AMCG00020450 LOC104957704 coding downstream 606529 19652823 ~ 19656766 (-)
AMCG00020452 dnaja2,LOC100286703,LOC106524269 coding upstream 43210 20319679 ~ 20327023 (-)
AMCG00020451 NA coding upstream 56218 20332687 ~ 20354695 (-)
AMCG00020463 itfg1,LOC106587292,LOC107598687,LOC107660666,LOC107723136 coding upstream 86641 20363110 ~ 20366992 (-)
AMCG00020462 NA coding upstream 186735 20463204 ~ 20464258 (-)
AMCG00020464 NA coding upstream 265049 20541518 ~ 20559873 (-)
G63346 NA non-coding downstream 6896 20255922 ~ 20256399 (-)
G63257 NA non-coding downstream 627052 19634294 ~ 19636243 (-)
G63180 NA non-coding downstream 1185537 19077477 ~ 19077758 (-)
G63096 NA non-coding downstream 1826356 18436525 ~ 18436939 (-)
G63092 NA non-coding downstream 1864564 18397467 ~ 18398731 (-)
G63447 NA non-coding upstream 806793 21083262 ~ 21083461 (-)
G63628 NA non-coding upstream 2105895 22382364 ~ 22384918 (-)
G63629 NA non-coding upstream 2107048 22383517 ~ 22391215 (-)
G63634 NA non-coding upstream 2138866 22415335 ~ 22419743 (-)
G63680 NA non-coding upstream 2269299 22545768 ~ 22546057 (-)
G62961 NA other downstream 2223335 18006168 ~ 18039960 (-)
AMCG00020403 NA other downstream 2247433 17987181 ~ 18015862 (-)
G62853 necab2 other downstream 2637106 17610664 ~ 17626189 (-)
AMCG00020346 nup93,LOC103368977 other downstream 3445528 16794996 ~ 16817767 (-)
G62618 NA other downstream 3470128 16792866 ~ 16793167 (-)
AMCG00020446 cssa11h16orf87,cunh16orf87,clg02h16orf87,zgc:92818,LOC106587296,LOC103043940,LOC107757775 other upstream 12101 20288570 ~ 20299843 (-)
G63464 NA other upstream 1035733 21312202 ~ 21312605 (-)
AMCG00020471 NA other upstream 1854373 22130842 ~ 22132737 (-)
AMCG00020489 rnf166,LOC106587267,LOC106562062,LOC107685853 other upstream 2164323 22440792 ~ 22466767 (-)
G63679 NA other upstream 2267373 22543842 ~ 22544689 (-)

Expression


Co-expression Network