AMCG00020488 (fam96b,LOC107673764,LOC107681502)


Basic Information

Item Value
gene id AMCG00020488
gene name fam96b,LOC107673764,LOC107681502
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 22352946 ~ 22354526 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020488
ATGTCTGTAGAGACGCGATTAGAAAATGCAAACCCTCTTATCTATCAGCGGTCAGGGGAAAGATTACTAACGGCGGAGGATGAAGACGAAGACTTTGCGGATCCTATCGACGACAGAGAAATTTTCGATATCCTTgttgttttttcccctaatTTCTTACATCTGATCAGATCCATTAATGACCCCGAGCACCCGCTGTCCCTGGAGGAGTTAAATGTCGTGGAACAAGTGAGGGTCCATGTGAACGACAAGGAGAGCGCCGTCTCTGTGGAGTTCACCCCCACCATCCCTCACTGCAGTATGGCCACCTTAATCGGCCTGTCCATCAAAGTCAAGCTGCTTAGATCACTACCGGACAGGTTCAAGATTGACGTGCACATAACACCTGGTACACATGCCTCTGAACAGGCAGTTAACAAACAGCTCGCAGACAAAGAAAGAGTCGCCGCAGCTTTGGAGAACTCGCACCTACTGGAAGTGGTGAACCAGTGTTTGTCTTCAAGAATTTAA

Function

NR:

description
mitotic spindle-associated MMXD complex subunit MIP18

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020488 True 510 mRNA 0.48 5 22352946 22354526

Neighbor

gene id symbol gene type direction distance location
AMCG00020482 rrad coding downstream 27981 22321085 ~ 22324965 (-)
AMCG00020483 NA coding downstream 45471 22270714 ~ 22307475 (-)
AMCG00020477 nae1,LOC107562218,LOC102793500 coding downstream 129247 22216569 ~ 22223699 (-)
AMCG00020475 NA coding downstream 138005 22196435 ~ 22214941 (-)
AMCG00020476 LOC107564548 coding downstream 168349 22165779 ~ 22184597 (-)
AMCG00020492 LOC107685863,LOC107600353 coding upstream 119767 22474293 ~ 22512944 (-)
AMCG00020493 NA coding upstream 198322 22552848 ~ 22579832 (-)
AMCG00020494 NA coding upstream 229132 22583658 ~ 22588193 (-)
AMCG00020495 cbfa2t3,LOC107730156,LOC107728039,LOC107685856 coding upstream 247414 22601940 ~ 22616819 (-)
AMCG00020498 NA coding upstream 423211 22777737 ~ 22789084 (-)
G63447 NA non-coding downstream 1269485 21083262 ~ 21083461 (-)
G63346 NA non-coding downstream 2096547 20255922 ~ 20256399 (-)
G63257 NA non-coding downstream 2716703 19634294 ~ 19636243 (-)
G63180 NA non-coding downstream 3275188 19077477 ~ 19077758 (-)
G63096 NA non-coding downstream 3916007 18436525 ~ 18436939 (-)
G63628 NA non-coding upstream 27838 22382364 ~ 22384918 (-)
G63629 NA non-coding upstream 28991 22383517 ~ 22391215 (-)
G63634 NA non-coding upstream 60809 22415335 ~ 22419743 (-)
G63680 NA non-coding upstream 191242 22545768 ~ 22546057 (-)
G63681 NA non-coding upstream 194889 22549415 ~ 22549727 (-)
AMCG00020471 NA other downstream 220209 22130842 ~ 22132737 (-)
G63464 NA other downstream 1040341 21312202 ~ 21312605 (-)
AMCG00020446 cssa11h16orf87,cunh16orf87,clg02h16orf87,zgc:92818,LOC106587296,LOC103043940,LOC107757775 other downstream 2053103 20288570 ~ 20299843 (-)
G62961 NA other downstream 4312986 18006168 ~ 18039960 (-)
AMCG00020403 NA other downstream 4337084 17987181 ~ 18015862 (-)
AMCG00020489 rnf166,LOC106587267,LOC106562062,LOC107685853 other upstream 86266 22440792 ~ 22466767 (-)
G63679 NA other upstream 189316 22543842 ~ 22544689 (-)
G63819 NA other upstream 800166 23154692 ~ 23161900 (-)
AMCG00020561 NA other upstream 2293477 24648003 ~ 24677810 (-)
AMCG00020559 NA other upstream 2337367 24691893 ~ 24698947 (-)

Expression


Co-expression Network