Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00020508 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030127.1 |
| NCBI id | CM030127.1 |
| chromosome length | 42978078 |
| location | 23045179 ~ 23052687 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0006508 | proteolysis | biological_process |
| GO:0031225 | anchored component of membrane | cellular_component |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0016805 | dipeptidase activity | molecular_function |
| GO:0008235 | metalloexopeptidase activity | molecular_function |
| GO:0008239 | dipeptidyl-peptidase activity | molecular_function |
| id | description |
|---|---|
| K01273 | DPEP; membrane dipeptidase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00020508 | True | 1113 | mRNA | 0.51 | 9 | 23045179 | 23052687 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00020506 | NA | coding | upstream | 43333 | 22994296 ~ 23001846 (+) |
| AMCG00020507 | NA | coding | upstream | 83448 | 22953442 ~ 22961731 (+) |
| AMCG00020500 | ist1 | coding | upstream | 128346 | 22909385 ~ 22916833 (+) |
| AMCG00020499 | spg7 | coding | upstream | 136450 | 22901112 ~ 22908729 (+) |
| AMCG00020497 | NA | coding | upstream | 268694 | 22759678 ~ 22776485 (+) |
| AMCG00020514 | ap1g1 | coding | downstream | 38567 | 23091254 ~ 23113539 (+) |
| AMCG00020512 | phlpp2,LOC106587330,LOC106587351 | coding | downstream | 67437 | 23120124 ~ 23161895 (+) |
| AMCG00020513 | usp10 | coding | downstream | 119113 | 23171800 ~ 23205292 (+) |
| AMCG00020515 | NA | coding | downstream | 161702 | 23214389 ~ 23232308 (+) |
| AMCG00020518 | zfhx3 | coding | downstream | 522419 | 23575106 ~ 23582740 (+) |
| G63772 | NA | non-coding | upstream | 71088 | 22973878 ~ 22974091 (+) |
| G63592 | NA | non-coding | upstream | 653938 | 22383517 ~ 22391241 (+) |
| G63564 | NA | non-coding | upstream | 662688 | 22352173 ~ 22382491 (+) |
| G63589 | fam96b,LOC106562058 | non-coding | upstream | 690200 | 22354018 ~ 22354979 (+) |
| G63562 | NA | non-coding | upstream | 837148 | 22207708 ~ 22208031 (+) |
| G63784 | NA | non-coding | downstream | 15624 | 23068311 ~ 23070149 (+) |
| G63787 | NA | non-coding | downstream | 24214 | 23076901 ~ 23077313 (+) |
| G63789 | NA | non-coding | downstream | 33691 | 23086378 ~ 23086933 (+) |
| G63890 | NA | non-coding | downstream | 797663 | 23850350 ~ 23897755 (+) |
| G63898 | LOC108433019,LOC103398424 | non-coding | downstream | 845820 | 23898507 ~ 23899754 (+) |
| AMCG00020487 | NA | other | upstream | 635686 | 22356174 ~ 22409493 (+) |
| AMCG00020470 | NA | other | upstream | 902981 | 22135368 ~ 22142198 (+) |
| AMCG00020438 | NA | other | upstream | 3408958 | 19631325 ~ 19636221 (+) |
| AMCG00020439 | LOC107696663,LOC107556242,LOC107746488,LOC107726063 | other | upstream | 3442855 | 19597203 ~ 19602324 (+) |
| G63045 | NA | other | upstream | 4711147 | 18332569 ~ 18334032 (+) |
| AMCG00020505 | NA | other | downstream | 1111 | 23053798 ~ 23062149 (+) |
| G63786 | znf821,LOC107747380 | other | downstream | 17724 | 23070411 ~ 23074945 (+) |
| AMCG00020529 | LOC107090538 | other | downstream | 980350 | 24033037 ~ 24068457 (+) |
| G63939 | NA | other | downstream | 999302 | 24051989 ~ 24055592 (+) |
| G64046 | NA | other | downstream | 1426148 | 24478835 ~ 24482114 (+) |
