AMCG00020602


Basic Information

Item Value
gene id AMCG00020602
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 25643747 ~ 25681156 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020602
GTTCCGCAATGGCCGCAGCTGCGCCAGACGGAGGGCAGAAACCCCTTAAAAACGCCATGAGACTAGCCAATGGCGCTATAGAGCTGGACGCGGGTAACCGCCACAAGGATGCTTACTGTGAATATCTTAAGAGCATGAACTTCATTTCCCAAGCACTTCTAGAGGAGGCAATACCCAAAAGTGAGACTGAGATTGTGACGGCAGAAGTCCTGAAGATGTTGAAGCTGGCAGAGCAGTGTTTAGAGAGGGTCAAATCCACTGCAGCCAAACTAGGCAAAGGGGAGGAGAAACCCCCAGGTCCAGAGCTGCCCAGACTCCCCCACAAGCCTGGCCACCGTAGGGTCCTGTCTGATGGGGCTGGGACTGCATCTCCCTTTCTACCCCCAGAGATCTTCCAGAAACTGCAGGTGGTGGAGGCACAGGCCGCGAAAAAAGAGCTGACCCCCATCGAGGAGGCCTCTATGCTTAACCAGAAACTGAAGGCAAATTACGAGGCTCGAGTGGCTCGCCTTAACCCCAGCCAGGCCATGCAGAAGACATCGCTGACCTTATCTCTTCAGCGGCAAATGATGGAGAACCTCATCATAGCCAAAGCCAGGCAGGCAGCACTTCAAAGAAAAATGGAAGAGAGGAGACTGAGGCTGCAGGAAGAAGCAAACCGGAGGTTCTCCAGCACGGTGACGGCCACACCAGAGGAGCAGGAGCTCAGAGTCCTGTATGCCAGTGTGCTCGAGTATGAGCAGGACCACGATTGGCCTAAGcagtggaaagaaaaacagaggaaaAACCCAGATGACATTTCCTTGATTAGTGGTCTGATCTCCTATATTCTCAGTTGCCCTGATCATCCCATTATGAAGCTCTTGAAGAGGCTGCAGTACAGAGTGTACAACAAACTCTACCCCATCGTGAGCAAGAGCACCTCCACCCAatccctgacctctgaccccctgGCTCCCCTTCCAGCTCTAGGCCCCTGCCCAGCCCTCAGCATGAAGACCTCCAAGAGCGTCCACTGCCTACAGTCTGTCCAGGAGCACAACCGTGCCAACAGCCAGAGACTGAAACACAGCCTGTCGGCCGCCTCGCTGCCCCTGATCGAGGACTACAACGCCAACCAAGAAGAGCAGGCCCCTCTGCCCATGGACGCCCAACCGGCCTGCACGCTGGACCGGGACAGCTCCTTCGAAGATCTAGAGCAGTTCCTCACCCAGCTGGAGTGTCACCCCGCCAGCCTGCTTGATGAGTCTCAGGTCCCCACCCTGGAGGAGAAGGCTCTTCAGGACCATCTGAAAGACATCGTGAAGGACATCCACAACTCCATTGACCGTCTCCTCTCCCTGTGTATCCTGTCCTTCGAGTGTCTGAACACCGCGGCTTCCAAAGATCAGTGTGTGGCCAGCATCGAGGAGGCTTTCTTCACCCCCATCTGGCCTCCCCTCCTGGCCCTATTCAGGAAAGTGTACTTGTGTAGGGAGATGGCCTTTGCCAAAAGCATGAAACTCTACAAAGACGCCACACCTGGAGATATCGGCGTTGCATACAAACTCTTCCCCCCCGACCCGGCTTCTCTCTCCGGATCCTACCCGTATGAAGCAGCGGTGCAAGAACTGAGACTCCTCTCCAAAGACTTCTGCCCACAGAAGAAACTAGAGTGTATTGttcgGGCTCTGCGCTTGATCTGCGAGTGTGCGGAGGATTACCGTAGTTACCATACACCGGCCGCCCCTCCCAGCGCCGCTGCCATCGGTGCCGATGACCTGCTCCCCATCCTCTCCTATGTGGCTGTGAGGAGCGAGCTGCCCCAGCTGGTAGCGGAGTGTGCCGCCCTGGAGGAGTTCATTCATGAAGGGTACCTGATCGGTGAGGAAGGCTACTGTCTCACATCCATGCAGAGTGCGCTCTCATACGTAGAGTCCCTGCATCGCCTCAAACCGGCTCCCTAAACTGCCCAGGCGTGCCACACTCTGTGGGAATAGGCCCAGACAGATTGGAGAAGGCCAAGCCTGAGTGGATATGTCACAATAAGCCAAGCGGGACATTTTAAGGACTTAAATATGGAATCCCCATTGCGATTTGAGATCTCGACGGCCTGCGTTTGAAGAGCGTTCGTCCGCCTTACTCACGGGTGAGCTGCCAACATCAGTGGTCCGTATGTGAGGCCAAAGGGATGTCCTTCATTAAAGAGTCGGCTAAAGGGAAATAGAGATGTTACTACCACCTTATTTGTTAGCCAGTTTTAGACATATTTCTGCTTGTTCTATTTGGGGTGCACCTTAGCTGTTTTGGTGGTCTGCAGGGTTCCCACATTACTAATTGTTCTTGTTGGCAGACAGCATGTTTAAAGATGCTGTGTCTTGATTCCCTTTAATAGTAGTTTCTTAGAAAAGTGAAACGCATTAAAGCCCAGCACTTTAAGCCTAAACCAGATAATCTGCCTCAATGGCAGGAAACTTTACACTCATATTTCCCTAGCTGCCTGTTCGATCTTTCTCCAGGAACAACAGCAAGGTTGACACATTTCCCCCTGCTTGCATTGCTGCCAAatccttgtgtttttttgttttttttccctctcagcTTATAATGCTGTGTATGGCCTCTATCTCCATGTAATTGTGTAATGTTGAAGGTGAAGCCGGGTGATGGGTTTGTAATGAGGAGCTTTGTGTGGTCTGTGTCTTCTGAAACCACGTCACTCTCTCAATGATCAATCTTCACAACTTCAAATGTGAGACATAAAAAAACTTGCTGGAGTCTGGTTTGAGAGGACCCATCTAAAACCAGtttggtttatgtatttatttgtatttgacttatttttaatgatttaaaaaagtcaCTGGAAATGTTAACTAATGAGCATATCCTCTATAGCAGCCCCTCTTAAATTCCAGTCCTGATTAAATTCTGCAGGACATtttataaactttattttgcGTCCTTGCTTTGCTTTGAGGTGAGAAATGAAGGACTGCAGTCTTCAATACTAGTGATGTAACGGAGGGTATCATTTGCACTGTGAACTTTGGTTCACAATTAAACTAATTCCTGACCTGAGAGTAAATCCAGGCCTTGAGTGAAAggatttgttaaaatgtattctgcaatTGCAGGGCTCTCAATTTATACATAAGATGCCTGCATGATACACTAGTTTAAGCTacaaatatacagatgtttgtgtctgctcATTTCAAGCTTTGAGTTTTGAGTCTCAATTCTGTGTCACAGCTGCTAATAAGATCGGAATCCTTCATCCTTTCTCCAGCAATCCTGTTATTCAGATGGGAAAGAGAAAGTGTACAATTCACAGAAGCAAAGTAAGATTTAGGATTACGTGTAGATCACATGAACTCCTCAACATCCGTTTCAACTggaatgattgttttaaatctgcatattcgggtgatattttttaaaacacaattgtaaaaacaaaaagaagtaTAGAGTATATTGTCTTGTCTGATTGTACAATTTGTGTAAAGCATGGCCAAAATATTAGGAAAGGTGCTCTAGAGGTGGGGAGGAATGTCACTCATTGGATATTCTCTGCCTAAAAGCGTTTTATCTTCTGCACAGCCATCATTCATGTTGAGCTGTATTCTCATTCGAATTACATTAGTGTGGAGACTGACATCAAACCTTTGGAGAACATTTCTAATGTACGAATAACATGTCCAAGTCTTGCACCGTTCCATAGAtgaaaccttttttgtttcagtCCTTTTTCTTTGAAATCTGTATTAGTGTTCAAGCTCGGAGGAAGTGGGAATGCTAAAGTTGGTAGTGCAATATACtgtaaacccccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020602 True 3815 mRNA 0.48 16 25643747 25681156

Neighbor

gene id symbol gene type direction distance location
AMCG00020601 NA coding downstream 48479 25590014 ~ 25595268 (-)
AMCG00020595 chmp1a,LOC106573671 coding downstream 69137 25565583 ~ 25574610 (-)
AMCG00020597 NA coding downstream 90778 25551590 ~ 25552969 (-)
AMCG00020594 gabarapl2,LOC107560072 coding downstream 163985 25473255 ~ 25479762 (-)
AMCG00020591 LOC102778684,LOC107573013 coding downstream 295429 25331073 ~ 25348318 (-)
AMCG00020605 NA coding upstream 47823 25728979 ~ 25737475 (-)
AMCG00020612 NA coding upstream 180599 25861755 ~ 25867205 (-)
AMCG00020615 NA coding upstream 229406 25910562 ~ 25917773 (-)
AMCG00020620 NA coding upstream 279222 25960378 ~ 25965307 (-)
AMCG00020618 NA coding upstream 284984 25966140 ~ 25971800 (-)
G64412 NA non-coding downstream 374 25640570 ~ 25643373 (-)
G64342 NA non-coding downstream 178397 25464877 ~ 25465350 (-)
G64341 NA non-coding downstream 179631 25463540 ~ 25464116 (-)
G64340 NA non-coding downstream 182105 25461427 ~ 25461642 (-)
G64274 NA non-coding downstream 379512 25261926 ~ 25264235 (-)
G64418 NA non-coding upstream 10252 25691408 ~ 25779211 (-)
G64477 NA non-coding upstream 250543 25931699 ~ 25932142 (-)
G64510 NA non-coding upstream 304292 25985448 ~ 25989689 (-)
G64562 NA non-coding upstream 510405 26191561 ~ 26192678 (-)
G64608 NA non-coding upstream 745994 26427150 ~ 26428274 (-)
G64298 NA other downstream 313177 25330084 ~ 25330570 (-)
AMCG00020590 LOC108250636 other downstream 340766 25289502 ~ 25302981 (-)
AMCG00020589 NA other downstream 359538 25272593 ~ 25284209 (-)
G64271 NA other downstream 401236 25242169 ~ 25242511 (-)
G64260 NA other downstream 432684 25209059 ~ 25211063 (-)
AMCG00020604 NA other upstream 6119 25687275 ~ 25715457 (-)
AMCG00020614 NA other upstream 204894 25886050 ~ 25905598 (-)
G64470 NA other upstream 217272 25898428 ~ 25918630 (-)
AMCG00020613 NA other upstream 253745 25934901 ~ 25948343 (-)
AMCG00020639 LOC107583916 other upstream 1564858 27246014 ~ 27249676 (-)

Expression


Co-expression Network