Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00020694 |
| gene name | wwox |
| gene type | misc |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030127.1 |
| NCBI id | CM030127.1 |
| chromosome length | 42978078 |
| location | 30449745 ~ 30531136 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| symbol | description |
|---|---|
| wwox | Predicted to enable oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor. Acts upstream of or within cellular calcium ion homeostasis. Predicted to be located in cytoplasm and nucleus. Is expressed in cranial nerve II; gut; heart; and presumptive cardiac ventricle heart tube. Human ortholog(s) of this gene implicated in autosomal recessive spinocerebellar ataxia 12; developmental and epileptic encephalopathy 28; esophageal cancer; esophagus squamous cell carcinoma; and squamous cell carcinoma. Orthologous to human WWOX (WW domain containing oxidoreductase). |
| description |
|---|
| PREDICTED: WW domain-containing oxidoreductase isoform X4 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00020694 | False | 537 | mRNA | 0.49 | 7 | 30449745 | 30530820 |
| TU81356 | True | 760 | TUCP | 0.46 | 4 | 30522986 | 30531136 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00020693 | NA | coding | downstream | 29111 | 30365020 ~ 30420634 (-) |
| AMCG00020692 | NA | coding | downstream | 304218 | 30128219 ~ 30145527 (-) |
| AMCG00020686 | NA | coding | downstream | 945333 | 29487288 ~ 29504412 (-) |
| AMCG00020680 | NA | coding | downstream | 981724 | 29464875 ~ 29468021 (-) |
| AMCG00020682 | NA | coding | downstream | 992094 | 29418816 ~ 29457651 (-) |
| AMCG00020699 | NA | coding | upstream | 226990 | 30758126 ~ 30760083 (-) |
| AMCG00020706 | NA | coding | upstream | 608557 | 31139693 ~ 31143403 (-) |
| AMCG00020705 | NA | coding | upstream | 614951 | 31146087 ~ 31151972 (-) |
| AMCG00020711 | NA | coding | upstream | 895385 | 31426521 ~ 31432953 (-) |
| AMCG00020712 | NA | coding | upstream | 904492 | 31435628 ~ 31448649 (-) |
| G65035 | wwox,LOC107555694,LOC107742620,LOC107669551 | non-coding | downstream | 58877 | 30126689 ~ 30390868 (-) |
| G65033 | NA | non-coding | downstream | 466380 | 29983113 ~ 29983365 (-) |
| G65023 | NA | non-coding | downstream | 563846 | 29885601 ~ 29885899 (-) |
| G64991 | LOC103376870 | non-coding | downstream | 1135686 | 29259557 ~ 29314059 (-) |
| G64912 | NA | non-coding | downstream | 1448112 | 28996392 ~ 29001633 (-) |
| G65050 | NA | non-coding | upstream | 4156 | 30535292 ~ 30535896 (-) |
| G65061 | NA | non-coding | upstream | 85744 | 30616880 ~ 30617134 (-) |
| G65068 | cdyl2,LOC106562298 | non-coding | upstream | 141609 | 30672745 ~ 30672962 (-) |
| G65071 | NA | non-coding | upstream | 162012 | 30693148 ~ 30693367 (-) |
| G65073 | NA | non-coding | upstream | 169350 | 30700486 ~ 30702173 (-) |
| AMCG00020685 | bat1,slc7a9,LOC106592435,LOC102305828,LOC106596152 | other | downstream | 916628 | 29520191 ~ 29533117 (-) |
| G65000 | NA | other | downstream | 1044109 | 29381315 ~ 29405636 (-) |
| G64882 | NA | other | downstream | 1652789 | 28788580 ~ 28796956 (-) |
| AMCG00020661 | ss18l2 | other | downstream | 2121433 | 28325037 ~ 28328312 (-) |
| AMCG00020657 | NA | other | downstream | 2210671 | 28161602 ~ 28239074 (-) |
| AMCG00020700 | NA | other | upstream | 191647 | 30722783 ~ 30737976 (-) |
| AMCG00020702 | NA | other | upstream | 269446 | 30800582 ~ 30808846 (-) |
| AMCG00020713 | NA | other | upstream | 834527 | 31365663 ~ 31412823 (-) |
| AMCG00020746 | NA | other | upstream | 1590749 | 32121885 ~ 32122933 (-) |
| G65549 | NA | other | upstream | 1827102 | 32358238 ~ 32365142 (-) |
