AMCG00020702


Basic Information

Item Value
gene id AMCG00020702
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 30800582 ~ 30808846 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020702
ATGGAGTCCACAGTGACCGATGCAGAGAAATACCTGGGCCAGTTCTGCACTGTGCTGGCGTCCTACACTCGCAAGACGGCCAAACTGAGGGACAAGGCTGACCTCCTGGTCAAGCAGCTCATAGACTTTGCCAACACAGAGAACCCAGAGCTCAGGACCTGTCTCAAGAGCTTCGCCGAAGACTTAGCCATGGTGCAGGACTACAGGCAAGCAGAGgtggaaCGGTTAGAAACCAGAGTGGTGGCTCCTCTGAAAGCTTACGGAGATATCATCAAGCACAAACGAGCAGACCTGAAGAAGTTCAGCACCGATCGCAACCGTGAGATTAAAGAAGTGGAGAAGCTGGAGAAAATGAGACAGAAAAACCCCTCAGACAGACAGGGCATTGCAGAAACCAACGCCCAGAAAGCAGCTGCAGACGTCAACCGAAGTACACGACAGCTTGAAGAAATCATTAATGATttccagaaacaaaaaatggaagACATCAAGaaaatcTTCACCGAGTTTATCATGGTGGAGATGCTTTTCCATTCAAAAGCCTTGGAGGTTTATTCCAATACTTTCCAAAACCTGGAAAATTTCGATATTGAGAAAGATCTGGAGATATACAGGTCAAGAGTCCAGATGTATGATGGGACAATGGATCCTCATGCTTTACAAACTGCCGGAATGTTGTCTACCATGCAGAGATACCCCAGCCCGACCCCATCCTCTATGAAACAGCTACCCAATTTATCCAGAAGGGCTCATCAAAGCAAACTGCGCAGGCAAaaggagatggaggaggaggaggaggaggaagaggaggaatcAGAAGAGGAGGACGATCTAGAGGATATAAGGAAGGCATATGATTATCAATATGCTAAAAACAGACGACAAAAGTTCATCAGTTGA
>TU81423
ACTGCACATGCTGCTCACATGTAACCCAGGTGAGAAACAACAACACCGAACTGCTTGTGCCAGAGAAAACCACCTGTGTTGTAGAtccaaaagaagaaaacatgaataGCATAATTTCCAGagaaacacagataAAGATCATGGAGTCCACAGTGACCGATGCAGAGAAATACCTGGGCCAGTTCTGCACTGTGCTGGCGTCCTACACTCGCAAGACGGCCAAACTGAGGGACAAGGCTGACCTCCTGGTCAAGCAGCTCATAGACTTTGCCAACACAGAGAACCCAGAGCTCAGGACCTGTCTCAAGAGCTTCGCCGAAGACTTAGCCATGGTGCAGGACTACAGGCAAGCAGAGgtggaaCGGTTAGAAACCAGAGTGGTGGCTCCTCTGAAAGCTTACGGAGATATCATCAAGCACAAACGAGCAGACCTGAAGAAGTTCAGCACCGATCGCAACCGTGAGATTAAAGAAGTGGAGAAGCTGGAGAAAATGAGACAGAAAAACCCCTCAGACAGACAGGGCATTGTATCCTTCCAAACAGACATCTCTCAGTCTCGGTCTGGATTGTCAACTACATATTCTA

Function

GO: NA

KEGG:

id description
K23868 FAM92; protein FAM92

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020702 True 900 mRNA 0.47 7 30800582 30805327
TU81423 False 585 TUCP 0.49 5 30803234 30808846

Neighbor

gene id symbol gene type direction distance location
AMCG00020699 NA coding downstream 40499 30758126 ~ 30760083 (-)
AMCG00020693 NA coding downstream 379948 30365020 ~ 30420634 (-)
AMCG00020692 NA coding downstream 655055 30128219 ~ 30145527 (-)
AMCG00020686 NA coding downstream 1296170 29487288 ~ 29504412 (-)
AMCG00020680 NA coding downstream 1332561 29464875 ~ 29468021 (-)
AMCG00020706 NA coding upstream 330847 31139693 ~ 31143403 (-)
AMCG00020705 NA coding upstream 337241 31146087 ~ 31151972 (-)
AMCG00020711 NA coding upstream 617675 31426521 ~ 31432953 (-)
AMCG00020712 NA coding upstream 626782 31435628 ~ 31448649 (-)
AMCG00020717 LOC108428436,LOC106927143,LOC105895635,LOC103149374 coding upstream 710379 31519225 ~ 31543659 (-)
G65073 NA non-coding downstream 98409 30700486 ~ 30702173 (-)
G65071 NA non-coding downstream 107215 30693148 ~ 30693367 (-)
G65068 cdyl2,LOC106562298 non-coding downstream 127620 30672745 ~ 30672962 (-)
G65061 NA non-coding downstream 183448 30616880 ~ 30617134 (-)
G65050 NA non-coding downstream 264686 30535292 ~ 30535896 (-)
G65109 NA non-coding upstream 21335 30830181 ~ 30830542 (-)
G65166 NA non-coding upstream 343573 31152419 ~ 31156265 (-)
G65178 NA non-coding upstream 404092 31212938 ~ 31217885 (-)
G65179 NA non-coding upstream 410697 31219543 ~ 31219744 (-)
G65221 gas8,LOC108276428 non-coding upstream 671910 31480756 ~ 31481969 (-)
AMCG00020700 NA other downstream 62606 30722783 ~ 30737976 (-)
AMCG00020694 wwox other downstream 269446 30449745 ~ 30531136 (-)
AMCG00020685 bat1,slc7a9,LOC106592435,LOC102305828,LOC106596152 other downstream 1267465 29520191 ~ 29533117 (-)
G65000 NA other downstream 1394946 29381315 ~ 29405636 (-)
G64882 NA other downstream 2003626 28788580 ~ 28796956 (-)
AMCG00020713 NA other upstream 556817 31365663 ~ 31412823 (-)
AMCG00020746 NA other upstream 1313039 32121885 ~ 32122933 (-)
G65549 NA other upstream 1549392 32358238 ~ 32365142 (-)
AMCG00020767 NA other upstream 1746014 32554860 ~ 32559096 (-)
AMCG00020774 snrpg other upstream 1799016 32607862 ~ 32610708 (-)

Expression


Co-expression Network