AMCG00020784


Basic Information

Item Value
gene id AMCG00020784
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 32699199 ~ 32703449 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020784
ATGCAGGCTGGTCTTTCTTTGCTGTCTGCCCTGGCTGTCATCTGTACCTTGTGCAGCAGAGGGCATTGTGTGGTGGGCAGACACAGCACTGCCTCCTCTCAGACCGTCAGCTTGGCAGGTCAGCGTACAGAGGGCAGCCAAGGGGGGAGAACCACGGAGCACCAGCCCTCCCCAGCGAGAGAGCCGCCCCCCACGAGCCCGGTTTCGAGGCGGGGACTGACGTCAACCATCTCGCGGTTACGACTCAGACCGAGAGAGTCCCCTCCCACCTCTGGAGCACGGCCCTCTGCACTGCCTGCTGAGTGGCAGACCTTCCCCAGTGATGCCCCTTCCAGCCCTACCCTCACTCAAAACTCCTTCAGAGACCTTCAGCTGCCCACGAATTCCCTGGCAGTTTGTGACATCCCTACTGCtccccctgcccctgcccctctctctccacctgtCTCCATCCCCACACCCCACCCCCTAGACTTTCTTTTCCAGCGGCCCACAGTAGGGCGCAGTGGGACGGGCGGCCCTCCACGGCGCTACAAACGCACACAGGGTGAGGAGGGTTCCCGGGGCCCCATACCAGGGCTGGGGTTTGCCCGGCATACCCTACGGtggcagctgctgcaggaggggCAGAGTCTGCGTCTGTCCACGTGGGCACAGCGGCGGGTCCTCCGACTGGCTTTCCGGCACTGGAGCGAGGCGTCACCGGTGTCGTTCATGGAGGACCAGGACTCCCCAGGATCAGAGGTCGATATCCGTGTGGGGTTTGGCACAGGTGAGCGGCGCCGGGAACAGGAGCCCCAAGggcgGCACCTGGGCTGCCCATGGCCATTCGATGGCCCAGGGGAGGAACTGGCCCATACACTGCAGCCCGGGGAAATCCACCTGGACGACGACGAGCCTTTCAGCACCCCCCCCTCAGAGCAGGGGCCCAGCCTGCTGCAGGTAGCTGTCCACGAGATCGGACACGTGCTGGGACTGGCGCACCTGCCCTATCCCGATTCTGTGATGCATCCCCTCTACCTGACCACTGGGGGCACTGTGGAGCTGAGCTGGCAGGACAGGAGGGCAGTGCAGGAGTTGTATGggcagtGTGAGGGACCCTTTGACGTGGTGTTTGACTGGGTGCGGAGGGAGGGCAGCCAGCAGGGGGCGCCAGTGCTGTGGTTCAACACCTTCTTCCTGCGGGGGGGGCAGTACTGGCTGTACGAGAACCGCAAGGGACGCCCTCGCTATGGCGACCCCCGCGCTCTGAGCACAGCATGGGGGGGGCTGGCAGGGGGGGCCATCAATGCCGTTGTACAAGTCTGGACCCTCGATTCTGACACCATGTTCTTCTTCAAAGGCACCCAGTACTGGTGCTATGACAGCATGGCAGACGGAGCGTTCACCCAGGATCCCGAGGGGCAGTCGTACCCTCGCCTGATTTCAGAGGGCTTCCCTGGCATCTCCGGCCCCCTGGACACCGCTGTCTTCCTCCGGCACCTGGGCTGCATCTACTTCTTCAAGGGCCAAGAGGTGCTGGCGTTCAGTGTGTCCAGTCAACAGATTGTGCAGGGCTTCCCCAAGAGACTGGAGGAGGTGTTCCCTGCCTCTGTCGAACAAGATCATCCCACAGGGCTGCACTACTGGGAAGTGGCCAGAGGGGGCGACCCCGAGTACTCCGTATCCCACAATGCCCTGCTGCCCCGGAGGAGGGTGGCGGAACAGTGGTTTGACCTGTGCGATGTCCACCCCAGCCAGCTGGACGACACATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020784 True 1755 mRNA 0.64 8 32699199 32703449

Neighbor

gene id symbol gene type direction distance location
AMCG00020773 NA coding downstream 24821 32668911 ~ 32674378 (-)
AMCG00020778 pgam2,LOC100691625,LOC101470049,LOC107706476,LOC107700776 coding downstream 54649 32642924 ~ 32644550 (-)
AMCG00020779 NA coding downstream 58964 32630067 ~ 32640235 (-)
AMCG00020781 NA coding downstream 74605 32619774 ~ 32624594 (-)
AMCG00020776 NA coding downstream 85242 32611491 ~ 32613957 (-)
AMCG00020785 NA coding upstream 43297 32746746 ~ 32748272 (-)
AMCG00020787 NA coding upstream 122206 32825655 ~ 32826629 (-)
AMCG00020788 NA coding upstream 259092 32962541 ~ 32980525 (-)
AMCG00020790 NA coding upstream 443012 33146461 ~ 33156561 (-)
AMCG00020792 NA coding upstream 494183 33197632 ~ 33207776 (-)
G65571 NA non-coding downstream 183582 32515403 ~ 32515617 (-)
G65468 NA non-coding downstream 483442 32212727 ~ 32215757 (-)
G65465 NA non-coding downstream 511488 32186482 ~ 32187711 (-)
G65397 NA non-coding downstream 637902 32058318 ~ 32061297 (-)
G65337 NA non-coding downstream 895407 31785515 ~ 31803792 (-)
G65753 NA non-coding upstream 570727 33274176 ~ 33274444 (-)
G65776 NA non-coding upstream 1102252 33805701 ~ 33852626 (-)
G65783 LOC105024168,LOC106563219,LOC104947650,LOC103362088 non-coding upstream 1128286 33831735 ~ 33835514 (-)
G65813 NA non-coding upstream 1257728 33961177 ~ 33962191 (-)
G65815 NA non-coding upstream 1278341 33981790 ~ 33982026 (-)
G65641 NA other downstream 42180 32655134 ~ 32657019 (-)
AMCG00020774 snrpg other downstream 88491 32607862 ~ 32610708 (-)
AMCG00020767 NA other downstream 140103 32554860 ~ 32559096 (-)
G65549 NA other downstream 334057 32358238 ~ 32365142 (-)
AMCG00020746 NA other downstream 576266 32121885 ~ 32122933 (-)
G65679 NA other upstream 182915 32886364 ~ 32891493 (-)
G65756 NA other upstream 665176 33368625 ~ 33369105 (-)
AMCG00020810 LOC103363194,LOC101160416,LOC107087288,LOC101481896,LOC107739988,LOC102234237,LOC107675956 other upstream 1518866 34222315 ~ 34239697 (-)
AMCG00020836 snrnp27,snut3,LOC106585104 other upstream 2105155 34808604 ~ 34814294 (-)
AMCG00020837 NA other upstream 2135312 34838761 ~ 34841323 (-)

Expression


Co-expression Network