AMCG00020785


Basic Information

Item Value
gene id AMCG00020785
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 32746746 ~ 32748272 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020785
ATGAATTTGAGTGGAAACTACATCCTCAAGATCAACCAGCAGACCTTCTCCAGCTTTCATTCCCTCATGTTCTTGGACCTCAGCTATGGCTGGCTGCATCACGTAGACAGCAACACGTTCACCTACATGAACTCTCTGGAGCACTTGCACCTGCAGCAGCATTGGTCCATCCTGCAGGTGGGCTCCCAAGCCTTCTACCAGCTCCCCAAGCTCCAGTCTCTAAGCATCGGGTCCATCCAGGACCCGGACTTGATCACCGTTTTCTTTGACCTCAAGTACTCCAAGCTGCGCAGGTTGAGATTGCACTTCATAAATTTCTTAAACATCAGGAAGACCACCTTTGAGTACCTTAAGCAATGCCCTCTGACCTTCTTGCATATTTTGTATGGTTCCATCAACCAGATAGAGGCCTTTGCGTTTTCAACGATGGAGGATCTGGAAGAGATTCTCATACAAGACGCCAGAATAACCTCCCTGCACTCCAGTGCATTCATGAATCTGAAGCTCCTGCAGACCCTGACTCTGCAAGGAAGCATCCTGCCTCAGATCCCCCCTGGATTGCTAGACTCCCTCGGCAATCTCCAGCGGCTCAGTCTGAGGGGCAACATGCTGCAGAGCCTCCCAGGAGACATGTTCAAGTACAACAGGAACCTCCAGTACATCGACCTCAGCCTCAACCACCTCCAGACTCTGCCCGAAGGCCTCTTTAACCCCTTCCCAGCCAGCCTCTACGTCAACTTCACATGGAACTTCTTCACCTGTGACTGCAGCCTGACCTGGGCATCCAGCTGGGTCGCCTCCCTGGAGAACCAATCGGTCAGCGAGGGATTCCAGTGCCACAACCCTCTAGACCTGCGCGGGAGGTTGCTGCAGGACTTCCATCCCATTTGCATCCCGTGGTATGTCTGGTATGTGATCGGTGCCCCCCTGGGAAGCTTGGTCTTAGGTGGCATCGTCGCCTTGCTATACAAAAGCCGCTGGAAGATCTATTATCAGTGGTACCTCCTGCTGTCCAAGAAGAGGGGAGTGTGGGAGGACCACCCAAGGTTTGCCTTTGACGCATTCGTGGCCTACAGTGACCGGGACTTCCAGTGGGTTCTGCACGAGCTCATCCCCCACCTGGAGGACACCGCTGGGCTGCCCAGCATCcggctgtgtgtgtcagaccGCGACTGGGACCTGGGCAGCCCCATCCTGGACAACATGGAGAGCAGCGTCCAGTGCAGCCGCAAGACCCTGTGCATCATCACCAGCCACTTCCTGAAGAGCGAGTGGTGCAAGCTGGAGATGAGCCTCGCACACATGCAGCTCTTCTCAGAGAACCGGGACGCGCTCATCTTCGTCTTTCTGGAGAAAATCCCCTCCGAGAGGCTCTCACAGCACCAGCGCCTCCGCAAGGAACTCTGCAAGAAGTCCTGCCTGGACTGGCCTGGAGCAGAGCCAGCTGCCCAGAGGGTATTCTGGGAGAAATTGCGCAGTCTCATCCTGAAACCCCACAGTGAGAACAGCAATGCCTCTCGCTTCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020785 True 1527 mRNA 0.55 1 32746746 32748272

Neighbor

gene id symbol gene type direction distance location
AMCG00020784 NA coding downstream 43297 32699199 ~ 32703449 (-)
AMCG00020773 NA coding downstream 72368 32668911 ~ 32674378 (-)
AMCG00020778 pgam2,LOC100691625,LOC101470049,LOC107706476,LOC107700776 coding downstream 102196 32642924 ~ 32644550 (-)
AMCG00020779 NA coding downstream 106511 32630067 ~ 32640235 (-)
AMCG00020781 NA coding downstream 122152 32619774 ~ 32624594 (-)
AMCG00020787 NA coding upstream 77383 32825655 ~ 32826629 (-)
AMCG00020788 NA coding upstream 214269 32962541 ~ 32980525 (-)
AMCG00020790 NA coding upstream 398189 33146461 ~ 33156561 (-)
AMCG00020792 NA coding upstream 449360 33197632 ~ 33207776 (-)
AMCG00020798 NA coding upstream 1167309 33915581 ~ 33923435 (-)
G65571 NA non-coding downstream 231129 32515403 ~ 32515617 (-)
G65468 NA non-coding downstream 530989 32212727 ~ 32215757 (-)
G65465 NA non-coding downstream 559035 32186482 ~ 32187711 (-)
G65397 NA non-coding downstream 685449 32058318 ~ 32061297 (-)
G65337 NA non-coding downstream 942954 31785515 ~ 31803792 (-)
G65753 NA non-coding upstream 525904 33274176 ~ 33274444 (-)
G65776 NA non-coding upstream 1057429 33805701 ~ 33852626 (-)
G65783 LOC105024168,LOC106563219,LOC104947650,LOC103362088 non-coding upstream 1083463 33831735 ~ 33835514 (-)
G65813 NA non-coding upstream 1212905 33961177 ~ 33962191 (-)
G65815 NA non-coding upstream 1233518 33981790 ~ 33982026 (-)
G65641 NA other downstream 89727 32655134 ~ 32657019 (-)
AMCG00020774 snrpg other downstream 136038 32607862 ~ 32610708 (-)
AMCG00020767 NA other downstream 187650 32554860 ~ 32559096 (-)
G65549 NA other downstream 381604 32358238 ~ 32365142 (-)
AMCG00020746 NA other downstream 623813 32121885 ~ 32122933 (-)
G65679 NA other upstream 138092 32886364 ~ 32891493 (-)
G65756 NA other upstream 620353 33368625 ~ 33369105 (-)
AMCG00020810 LOC103363194,LOC101160416,LOC107087288,LOC101481896,LOC107739988,LOC102234237,LOC107675956 other upstream 1474043 34222315 ~ 34239697 (-)
AMCG00020836 snrnp27,snut3,LOC106585104 other upstream 2060332 34808604 ~ 34814294 (-)
AMCG00020837 NA other upstream 2090489 34838761 ~ 34841323 (-)

Expression


Co-expression Network