AMCG00020787


Basic Information

Item Value
gene id AMCG00020787
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 32825655 ~ 32826629 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020787
ATGTCATTGAATGACACAAAATACTCCATCTGGGTACTGACCAGCATCATGGCCTTTTTGACAATCTTCTTCAACGTCTATATCGTGCTGACCAACCTGAAGATCTACCGCAAGAACGGCCACTTGCTGCCCTGCGAGATCATCATCACCACGCTGTGCTTCTGCAACGGCGCCCACCAGCTGGCCTGCTACCTGTGGATGACCCTGGACAATCTGGACATCGTCTGCATCCTGAATGATCTCGTCTATTCCCTCCTCATTGTGGTAATCTACAGCCTTAAGTTCTCCATCGTGTGGACCACCGCCTTCCTGTCCTTCTTCTACAGCACCAAGCTGGTGATCGAGCCCATCCACTGCTACACCAGGATCCAGGAGGGGTTCCTCAAGCACACCACCACCGTGTCCCTGGCCATCCTCCTGGTGGGCTTCGGGACCTGCATGCCCATGGTCTCAGTGTTGGTCATCAACAATACCACACACGGCAACATGGACTGCGGCATCCTGGTCCCCGTGACCACTTCAGGCTACATCTACATGGGCTACTACCTAATTATGTCCGACCTCGTCCCCGGCCTGCTGGTGATCAAGTCCAGCATCTCCATCGTCATCCACCTGGGCATCCACCTGTACCACATGAAGGCCAGCACCAACGGCTTCCATGGCCCCAAGCTGGGCTCGGAGATGAGGGTGATCCGCATGATGCTGGGCCTGGTGGCAGTGTTCTTCTGCTTCGTGGCAATGGACCTGTACATGCACTACCGCAATGTCATGTTCCACAACGCCATGTTGTACCTCACCGGCCTCTTTACCTCGGTCTACACGGCTGCCAGCTCCCTCATCCTGCTCTACGGCAAGAAGAGCAACTGGAAGGAGCTGCTGCACATCTACAACCAGTTCTTAGACGAGTACCCCTGCCTGGCCTGCCTCAAGGTGCCGGAGGGCAAGCGCAAGGACACGGCGGAGGACAAACACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020787 True 975 mRNA 0.56 1 32825655 32826629

Neighbor

gene id symbol gene type direction distance location
AMCG00020785 NA coding downstream 77383 32746746 ~ 32748272 (-)
AMCG00020784 NA coding downstream 122206 32699199 ~ 32703449 (-)
AMCG00020773 NA coding downstream 151277 32668911 ~ 32674378 (-)
AMCG00020778 pgam2,LOC100691625,LOC101470049,LOC107706476,LOC107700776 coding downstream 181105 32642924 ~ 32644550 (-)
AMCG00020779 NA coding downstream 185420 32630067 ~ 32640235 (-)
AMCG00020788 NA coding upstream 135912 32962541 ~ 32980525 (-)
AMCG00020790 NA coding upstream 319832 33146461 ~ 33156561 (-)
AMCG00020792 NA coding upstream 371003 33197632 ~ 33207776 (-)
AMCG00020798 NA coding upstream 1088952 33915581 ~ 33923435 (-)
AMCG00020804 es1,LOC108430344,LOC107553036,LOC107714576 coding upstream 1166180 33992809 ~ 33995725 (-)
G65571 NA non-coding downstream 310038 32515403 ~ 32515617 (-)
G65468 NA non-coding downstream 609898 32212727 ~ 32215757 (-)
G65465 NA non-coding downstream 637944 32186482 ~ 32187711 (-)
G65397 NA non-coding downstream 764358 32058318 ~ 32061297 (-)
G65337 NA non-coding downstream 1021863 31785515 ~ 31803792 (-)
G65753 NA non-coding upstream 447547 33274176 ~ 33274444 (-)
G65776 NA non-coding upstream 979072 33805701 ~ 33852626 (-)
G65783 LOC105024168,LOC106563219,LOC104947650,LOC103362088 non-coding upstream 1005106 33831735 ~ 33835514 (-)
G65813 NA non-coding upstream 1134548 33961177 ~ 33962191 (-)
G65815 NA non-coding upstream 1155161 33981790 ~ 33982026 (-)
G65641 NA other downstream 168636 32655134 ~ 32657019 (-)
AMCG00020774 snrpg other downstream 214947 32607862 ~ 32610708 (-)
AMCG00020767 NA other downstream 266559 32554860 ~ 32559096 (-)
G65549 NA other downstream 460513 32358238 ~ 32365142 (-)
AMCG00020746 NA other downstream 702722 32121885 ~ 32122933 (-)
G65679 NA other upstream 59735 32886364 ~ 32891493 (-)
G65756 NA other upstream 541996 33368625 ~ 33369105 (-)
AMCG00020810 LOC103363194,LOC101160416,LOC107087288,LOC101481896,LOC107739988,LOC102234237,LOC107675956 other upstream 1395686 34222315 ~ 34239697 (-)
AMCG00020836 snrnp27,snut3,LOC106585104 other upstream 1981975 34808604 ~ 34814294 (-)
AMCG00020837 NA other upstream 2012132 34838761 ~ 34841323 (-)

Expression


Co-expression Network