AMCG00020788


Basic Information

Item Value
gene id AMCG00020788
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 32962541 ~ 32980525 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020788
ATGGAAACCACAGTTTTGAGTCTTGCCTCTCATCTGCAGGAAGATGACAATAGAGTGTGTTACACCACTGTGATACACACGGGCTCCCCAAGGAACTCCGTGCTGCAGATGCATGACAAGGCTGTGTACGCCACGgtccAGTCTAACAACAGGCTTACTAACTCTTCCGGACCAGAGCAGAAAGCCAGGATTCGCTGTGAGGCCGACAGAGGAACACGCTGCCATTTCTACACTGATCAGAGTGAGGTCCCGTTCCGATCGGAGCCGTACCGTGAAAACTATAAGATTTGTGTCCTCAGTGTGTCTGGAAGGcagctgctgagagagagaggcaggagtCCCAGGGCTGAGGTGTCTGTGAGCTGTGCTGTTGAACTGGAGACCAGGAGCGAAGCAATAATCTCACAGCGCAGCGAGGAGATCAGCATCGAAGTGGAGGACTCGACCATCACTGCACCACAACAGCCTGAAACGCATCTGCAGGAAGATGACAACAGAGTGTGTTACGCCACTGTGATACACACGGGCTCCCCAAGGAACATCGTGCTGCAGATGCATGACAAGGCTGAGTACGCCACGGTGATGAAGCCATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020788 True 594 mRNA 0.53 6 32962541 32980525

Neighbor

gene id symbol gene type direction distance location
AMCG00020787 NA coding downstream 135912 32825655 ~ 32826629 (-)
AMCG00020785 NA coding downstream 214269 32746746 ~ 32748272 (-)
AMCG00020784 NA coding downstream 259092 32699199 ~ 32703449 (-)
AMCG00020773 NA coding downstream 288163 32668911 ~ 32674378 (-)
AMCG00020778 pgam2,LOC100691625,LOC101470049,LOC107706476,LOC107700776 coding downstream 317991 32642924 ~ 32644550 (-)
AMCG00020790 NA coding upstream 165936 33146461 ~ 33156561 (-)
AMCG00020792 NA coding upstream 217107 33197632 ~ 33207776 (-)
AMCG00020798 NA coding upstream 935056 33915581 ~ 33923435 (-)
AMCG00020804 es1,LOC108430344,LOC107553036,LOC107714576 coding upstream 1012284 33992809 ~ 33995725 (-)
AMCG00020805 NA coding upstream 1042494 34023019 ~ 34027562 (-)
G65571 NA non-coding downstream 446924 32515403 ~ 32515617 (-)
G65468 NA non-coding downstream 746784 32212727 ~ 32215757 (-)
G65465 NA non-coding downstream 774830 32186482 ~ 32187711 (-)
G65397 NA non-coding downstream 901244 32058318 ~ 32061297 (-)
G65337 NA non-coding downstream 1158749 31785515 ~ 31803792 (-)
G65753 NA non-coding upstream 293651 33274176 ~ 33274444 (-)
G65776 NA non-coding upstream 825176 33805701 ~ 33852626 (-)
G65783 LOC105024168,LOC106563219,LOC104947650,LOC103362088 non-coding upstream 851210 33831735 ~ 33835514 (-)
G65813 NA non-coding upstream 980652 33961177 ~ 33962191 (-)
G65815 NA non-coding upstream 1001265 33981790 ~ 33982026 (-)
G65679 NA other downstream 71048 32886364 ~ 32891493 (-)
G65641 NA other downstream 305522 32655134 ~ 32657019 (-)
AMCG00020774 snrpg other downstream 351833 32607862 ~ 32610708 (-)
AMCG00020767 NA other downstream 403445 32554860 ~ 32559096 (-)
G65549 NA other downstream 597399 32358238 ~ 32365142 (-)
G65756 NA other upstream 388100 33368625 ~ 33369105 (-)
AMCG00020810 LOC103363194,LOC101160416,LOC107087288,LOC101481896,LOC107739988,LOC102234237,LOC107675956 other upstream 1241790 34222315 ~ 34239697 (-)
AMCG00020836 snrnp27,snut3,LOC106585104 other upstream 1828079 34808604 ~ 34814294 (-)
AMCG00020837 NA other upstream 1858236 34838761 ~ 34841323 (-)
G66054 NA other upstream 1882094 34862619 ~ 34865305 (-)

Expression


Co-expression Network