AMCG00020792


Basic Information

Item Value
gene id AMCG00020792
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 33197632 ~ 33207776 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020792
ATGTCACTTAAGGGGGACGAAGACTTCCTTGTTGTCTGGGGGTCTCGTGTTTTCGATGGCCGATTAGCCTTCTCCTTCCTCCAGGCTCTGCTGCTTGTGTTGCACTGCAGGGGTCAGAGGTTGTGCCCTCCAACCTGCCGCTGCGAAGGCAAGATCGTTTACTGCGAGTCGGGAGCCTTCCACGACGTGCCGGACAATGTGTCTGCAGGCTGCCAGGGCCTGTCCCTGCGCTACAACAACATGCAGCGCCTCTACTCCTCCCAGTTCTCCCACCTCAACCAGCTCATCTGGCTCTACCTGGACCACAACTACATCAACAGCGTGGACAGCGACGCCTTCCGGGGCGTCCGGCGGCTGAAGGAGCTGATCCTGAGCTCCAACAAGATCGTGCAGCTCCACAACACCACCTTCCACACCGTGCCCAACCTGCGCAACCTGGACCTGTCCTACAACAAGCTACAGGCGCTGCAGCCCGGGCAGTTCCAGGGCCTGCGCAAACTGCTCAGCCTCCACCTGCGCTCCAACTCTCTCAAGAGTGTCCCCATTAGGGTCTTCCAGGAGTGCCGAAGCCTGGAGTTCCTAGACCTGGGCTACAACCGTCTGCGCAGCCTGACTCGCACCACGTTCTTGGGGCTGCTGAAGCTGACTGAGCTGCACTTGGAGCACAACCAGTTCTCCAAGATCAACTTCTTCCTCTTCCCGCGCCTCGCCAACCTGCGGGCGCTGTACCTGCAGTGGAACCGTATTCGCTCCATCAGTCAGGGGCTCTCCTGGACCTGGACCTCCCTGCAGAAGCTGGACCTCTCGGGCAATGAAATCCAAGCCTTAGACACAGTTGTCTTCCAGTGCCTGCCCAACCTGCAGACGCTCAACCTGGAATCTAACAAGCTCAGCAACGTCTCCCAGGATGCGGTCTCTGCCTGGATCTCGCTGACCACCATCAGCCTGGCGGGCAACGTGTGGGACTGCAGCCCCAGCATCTGCCCCCTGGTGGCCTGGCTGAGGAGCTTTAAAGGCACCAAGGACACCACCATGATCTGTACCAGCCCCAAGCCACTACAGGGGGAGAAGGTGATGGAAGCAGTGAGAAACTACAGCATCTGCAGAGAGCCTCTCACCCTGGTTCCCACTCTTCCtccaaccaccaccaccaccacaatggCCACAACCACAACAAGGAGAAGCCCTCCTCCCACTTCCCAGGCACCGGCCAGGCCCAGGTTCCTGCCCCACCCGACCACTCCCAGACTGGGGAAGGCAGACTCTCACGATGCCGTGCCAACAGCGCCCCGCCCCAGCGTCCTCTCCTTCACCCCCGAGCCGGAGTTCGAGCACATGTCCTTCCACAAGATCATCGCGGGCAGCGTGGCGCTCTTCCTGTCAGTAGCCTTGATCCTGCTGGTGATCTACGTCTCGTGGAAACGCTACCCGAACACCATGcggcagctgcagcagcactcCATGGGCCGCAAGCGCAGGAAAAAGGCACAGGAGACTGAGCACAACCTTACCCCTCAGTTGCAGGAGTATTATATGAACTACAATCCCACAAACTCTGAGACCATGGACGTGCTGGTCAATGGTACGGGGCCCTGCACCTGCACTATCTCTGGCTCCAGGGAATGCGAGTGCTGCGGGGACTCCTACACCAAGACTGCCAAGGgaaaaagcaagcaagcaaacgAAACGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020792 True 1692 mRNA 0.59 3 33197632 33207776

Neighbor

gene id symbol gene type direction distance location
AMCG00020790 NA coding downstream 41071 33146461 ~ 33156561 (-)
AMCG00020788 NA coding downstream 217107 32962541 ~ 32980525 (-)
AMCG00020787 NA coding downstream 371003 32825655 ~ 32826629 (-)
AMCG00020785 NA coding downstream 449360 32746746 ~ 32748272 (-)
AMCG00020784 NA coding downstream 494183 32699199 ~ 32703449 (-)
AMCG00020798 NA coding upstream 707805 33915581 ~ 33923435 (-)
AMCG00020804 es1,LOC108430344,LOC107553036,LOC107714576 coding upstream 785033 33992809 ~ 33995725 (-)
AMCG00020805 NA coding upstream 815243 34023019 ~ 34027562 (-)
AMCG00020803 NA coding upstream 849178 34056954 ~ 34075604 (-)
AMCG00020807 NA coding upstream 904867 34112643 ~ 34113689 (-)
G65571 NA non-coding downstream 682015 32515403 ~ 32515617 (-)
G65468 NA non-coding downstream 981875 32212727 ~ 32215757 (-)
G65465 NA non-coding downstream 1009921 32186482 ~ 32187711 (-)
G65397 NA non-coding downstream 1136335 32058318 ~ 32061297 (-)
G65337 NA non-coding downstream 1393840 31785515 ~ 31803792 (-)
G65753 NA non-coding upstream 66400 33274176 ~ 33274444 (-)
G65776 NA non-coding upstream 597925 33805701 ~ 33852626 (-)
G65783 LOC105024168,LOC106563219,LOC104947650,LOC103362088 non-coding upstream 623959 33831735 ~ 33835514 (-)
G65813 NA non-coding upstream 753401 33961177 ~ 33962191 (-)
G65815 NA non-coding upstream 774014 33981790 ~ 33982026 (-)
G65679 NA other downstream 306139 32886364 ~ 32891493 (-)
G65641 NA other downstream 540613 32655134 ~ 32657019 (-)
AMCG00020774 snrpg other downstream 586924 32607862 ~ 32610708 (-)
AMCG00020767 NA other downstream 638536 32554860 ~ 32559096 (-)
G65549 NA other downstream 832490 32358238 ~ 32365142 (-)
G65756 NA other upstream 160849 33368625 ~ 33369105 (-)
AMCG00020810 LOC103363194,LOC101160416,LOC107087288,LOC101481896,LOC107739988,LOC102234237,LOC107675956 other upstream 1014539 34222315 ~ 34239697 (-)
AMCG00020836 snrnp27,snut3,LOC106585104 other upstream 1600828 34808604 ~ 34814294 (-)
AMCG00020837 NA other upstream 1630985 34838761 ~ 34841323 (-)
G66054 NA other upstream 1654843 34862619 ~ 34865305 (-)

Expression


Co-expression Network