AMCG00020798


Basic Information

Item Value
gene id AMCG00020798
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 33915581 ~ 33923435 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020798
ATGGTGCCACTGGGGGAGAACATGACGCCCGAGTCCCTGCCTCAGAACTGCAGCAACTGCACCCAGGCCCCCGGGGGCAGCCCGAGCCTGGATCTGACCAAGGCAGTGGCGCTGGGGCTGGTGCTGGGGCTTCTCATCCTGTTTGGCATCCTGGGCAACATCCTGGTCATCCTGTCGGTGGCGTGTCACCGGAACCTGCAGACGGTCACGCACTACTTCATCGTCAACCTGGCGGTGGCCGACCTACTGCTGACCTCCACGGTGCTGCCCTTCTCGGCCATCTTCGAGATCCTGGGTCACTGGGTGTTCGGCCGTGTCTTCTGCAACATCTGGGCGGCCGTGGACGTGCTGTGCTGCACCGCCTCCATCATGAGCCTGTGCGTGATCTCGGTGGACCGCTACGTGGGCGTGAGCTACCCGCTGCGCTACCCGGCCCTGATGACGGAGAAGCGTGCCGTGTTGGCGCTGCTGGGGCTGTGGGCGCTCTCCATCACCATCTCCATCGGGCCGCTGTTCGGCTGGAAGGAGCCGGCGCCAGAGGACGAGACGGTGTGCAAGATCACTGAGGAGCCGGGCTACGCCATCTTCTCCGCCGTGGGCTCCTTCTACCTCCCGCTTGCCGTAATCCTAGCCATGTACTGCCGCGTATATGTGGTGGCGCGGCGCGAGACCAAGAGCCTGCGGGAAGGGATGAAGACCGACAAGTCCGACGCCGAGGGGGTGACCCTGCGCATGCATCGCGGGAACTGCCCCTCCCacgccaccccccccaccaccaactCCGGTCACACCAACGCAGCCGGCAGCGAGGAGGAGGCCCTGCACGGACGCCTGCACTTCTCCATGCGGCTGCTCAAGTTCTCCCATGAGAAGAAGGCCGCCAAGACGCTGGGCATCGTGGTGGGCTGCTTTGTGCTGTGCTGGCTGCCGTTCTTCCTGGTGATGCCCATTGGCTCCATTTTCCCTGCCTACCGCCCGTCAGACACCGTGTTCAAGATCACCTTCTGGCTGGGCTACTTCAACAGCTGCATGAACCCCATCATCTACCCCTGCTCCAGCCAGGAGTTTAAGAAGGCCTTCCAGAACGTACTGAGGGTGCAGTGCCTGAAACGGAAAGCCGGCCAGACCTGCAAGTCGCACTCCCTGACGCCGGGGCACAGGCAGCACCCTGGGGGCCTGGAGCTTGGAGGGCGAGGGGATCTGGGACGCAGCCCATCGGCAACCCCGGTGCTGACCCGTGGCGGAGGGGGCGGTGGCGGGGAGCGGGGACTGTATGCAGGAGCATCCACGCTGCTCCCCCCGCCCACTCTCCACAGCTGCCGCGCTGAGGCTGCCCGAGTGTGCAGCAAGAGTCTGCTGAGGGCGTGCTGCTGTGTCGCCAACGGAGAGCCGACGCAGTTCCCCGTGCCACCGCTGCCCTCACCATCCGCGCCCGTCTTCAAGGTGCACAAGCTGTCGCTGTGCCACAATGGAGAGGCTGTTTAA

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016020 membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K04135 ADRA1A; adrenergic receptor alpha-1A

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020798 True 1485 mRNA 0.65 2 33915581 33923435

Neighbor

gene id symbol gene type direction distance location
AMCG00020792 NA coding downstream 707805 33197632 ~ 33207776 (-)
AMCG00020790 NA coding downstream 759020 33146461 ~ 33156561 (-)
AMCG00020788 NA coding downstream 935056 32962541 ~ 32980525 (-)
AMCG00020787 NA coding downstream 1088952 32825655 ~ 32826629 (-)
AMCG00020785 NA coding downstream 1167309 32746746 ~ 32748272 (-)
AMCG00020804 es1,LOC108430344,LOC107553036,LOC107714576 coding upstream 69374 33992809 ~ 33995725 (-)
AMCG00020805 NA coding upstream 99584 34023019 ~ 34027562 (-)
AMCG00020803 NA coding upstream 133519 34056954 ~ 34075604 (-)
AMCG00020807 NA coding upstream 189208 34112643 ~ 34113689 (-)
AMCG00020811 NA coding upstream 285474 34208909 ~ 34211086 (-)
G65776 NA non-coding downstream 62955 33805701 ~ 33852626 (-)
G65783 LOC105024168,LOC106563219,LOC104947650,LOC103362088 non-coding downstream 80067 33831735 ~ 33835514 (-)
G65753 NA non-coding downstream 641137 33274176 ~ 33274444 (-)
G65571 NA non-coding downstream 1399964 32515403 ~ 32515617 (-)
G65468 NA non-coding downstream 1699824 32212727 ~ 32215757 (-)
G65813 NA non-coding upstream 37742 33961177 ~ 33962191 (-)
G65815 NA non-coding upstream 58355 33981790 ~ 33982026 (-)
G65844 NA non-coding upstream 126561 34049996 ~ 34051069 (-)
G65845 NA non-coding upstream 129025 34052460 ~ 34053108 (-)
G65858 NA non-coding upstream 193171 34116606 ~ 34116943 (-)
G65756 NA other downstream 546476 33368625 ~ 33369105 (-)
G65679 NA other downstream 1024088 32886364 ~ 32891493 (-)
G65641 NA other downstream 1258562 32655134 ~ 32657019 (-)
AMCG00020774 snrpg other downstream 1304873 32607862 ~ 32610708 (-)
AMCG00020767 NA other downstream 1356485 32554860 ~ 32559096 (-)
AMCG00020810 LOC103363194,LOC101160416,LOC107087288,LOC101481896,LOC107739988,LOC102234237,LOC107675956 other upstream 298880 34222315 ~ 34239697 (-)
AMCG00020836 snrnp27,snut3,LOC106585104 other upstream 885169 34808604 ~ 34814294 (-)
AMCG00020837 NA other upstream 915326 34838761 ~ 34841323 (-)
G66054 NA other upstream 939184 34862619 ~ 34865305 (-)
AMCG00020853 H2AFV,h2afvb,LOC107386217,LOC105007341,LOC107668744 other upstream 1226133 35149568 ~ 35170179 (-)

Expression


Co-expression Network