AMCG00020811


Basic Information

Item Value
gene id AMCG00020811
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 34208909 ~ 34211086 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020811
ATGGAGTGCCGCCTCTTGGTCCTGCTGTCTTCGCTGTTCATGTCCCACTGGGGGGTCGGCTCTGTCCGCTCCGAGCGCATCCCGTTACCGGGCACCGTGGAGCCCACAAGCGACACCCAGCACAGGGGGTCTCCAGAGCAGCTCGGCCACACAGAAGAGGTGGCACCCGACCCTGCGGAGGCCATGGCGGCGGGCAGTGGACATCAGGCTCCGTACCAGGGCCAGCGGTACCCGCTCTACATGATGCAGCTGTACCGCTCCCTTGCGGCCGGGGACGGCGCACCGGCCAGCGCTCCCACCGAGGTGGACAACCTGGCTCTGCAGGAGTCCGACTCCGTGATGAGTCTCATGGCCAAAAGCTGCTACCAGGAAGGAGACAAGTGGACCGTGACCTTCGACATGTCCTCCATCTCGGCCAGCGACGAGGTGCGTCTGTCTGAGCTGCGGTTCAGGCTGCCCTCCTTCTCCGGCTCCAACCGCGTGACCGTGGAGATCTTCCACTCCGGGGAGGGCCCCTGCCCCCCCAGCAGCCCCTCCGAGGCCTGCCAGGAGAGCCTCTTCCTGGGCAGCTTCAGCGCCACTCCGGCCGACACATCATCCTCCTGGAAGGTGTTCAACATCACCGACCTGCTGAAGTACTGGCTGCACCAGGCCCACGGGCAGAGCTTCCCCGGAGGCAGGGAGGGCAGCGAGGAGCCCCGTGGGGAGCAGGAGGAGGGCAGCGAGGAGGCGGCCCAGCAGAGGCAGAGGCACATGCTGAAACACCAGGGCTCCAGCGACGGGCAGTGGCACAGCACCACGGACCAGGTCATGATGGTAGTCTTTTCCAAGCACAACCAGACAGGTGTGGCCGTGGGCGCCCCCACCCTCATCCACACCGTGGAGCACTCCAAGTACGTCATCCTGGAGCGCGGCCCAGCTGGAGACATGGCTGTCCGCCGGCACAGGAGGAACCGGATCGAGCGGGAGAGGGTGAAGCTGGCGGGTGGCGGAGGGCCCACTGCCCCTGCCCCTGAGGCCGCCGCCGCTGCCGCCACACGCCCACTCTGCAGAAAGGTGGACATGTGGGTGGACTTCGACCAGATTGGCTGGAAAGACTGGATCGTCTACCCCAAGCGCTACAACGCCTTCCGCTGCGAGGGGGACTGCCCCAGCCCCGTGGACGAGTCCTTCAACCCCACCAACCATGCCTACATGCAGAGCCTGCTGAAGCTGTACCAGCCCGACCGGGTGTCGTGCCCGTCCTGCGTGCCCACGCGGCTCAGCCCGCTGTCCATGCTGTACTACGAGAACGAGGAGGTGGTCCTGCGTCACCATGAGGACATGATTGTGGAGGAGTGCGGCTGCCACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020811 True 1353 mRNA 0.66 3 34208909 34211086

Neighbor

gene id symbol gene type direction distance location
AMCG00020807 NA coding downstream 95220 34112643 ~ 34113689 (-)
AMCG00020803 NA coding downstream 133305 34056954 ~ 34075604 (-)
AMCG00020805 NA coding downstream 181347 34023019 ~ 34027562 (-)
AMCG00020804 es1,LOC108430344,LOC107553036,LOC107714576 coding downstream 213184 33992809 ~ 33995725 (-)
AMCG00020798 NA coding downstream 285474 33915581 ~ 33923435 (-)
AMCG00020813 NA coding upstream 5810 34216896 ~ 34220680 (-)
AMCG00020812 NA coding upstream 28803 34239889 ~ 34272166 (-)
AMCG00020815 NA coding upstream 78901 34289987 ~ 34314712 (-)
AMCG00020821 tmem150a,LOC106585116,LOC106580507 coding upstream 222339 34433425 ~ 34441728 (-)
AMCG00020822 NA coding upstream 232200 34443286 ~ 34456490 (-)
G65858 NA non-coding downstream 91966 34116606 ~ 34116943 (-)
G65845 NA non-coding downstream 155801 34052460 ~ 34053108 (-)
G65844 NA non-coding downstream 157840 34049996 ~ 34051069 (-)
G65815 NA non-coding downstream 226883 33981790 ~ 33982026 (-)
G65813 NA non-coding downstream 246718 33961177 ~ 33962191 (-)
G65867 NA non-coding upstream 3971 34215057 ~ 34215559 (-)
G65872 NA non-coding upstream 7673 34218759 ~ 34220010 (-)
G65915 NA non-coding upstream 205571 34416657 ~ 34420190 (-)
G65957 NA non-coding upstream 303282 34514368 ~ 34515898 (-)
G66001 NA non-coding upstream 535855 34746941 ~ 34747361 (-)
G65756 NA other downstream 839804 33368625 ~ 33369105 (-)
G65679 NA other downstream 1317416 32886364 ~ 32891493 (-)
G65641 NA other downstream 1551890 32655134 ~ 32657019 (-)
AMCG00020774 snrpg other downstream 1598201 32607862 ~ 32610708 (-)
AMCG00020767 NA other downstream 1649813 32554860 ~ 32559096 (-)
AMCG00020810 LOC103363194,LOC101160416,LOC107087288,LOC101481896,LOC107739988,LOC102234237,LOC107675956 other upstream 11229 34222315 ~ 34239697 (-)
AMCG00020836 snrnp27,snut3,LOC106585104 other upstream 597518 34808604 ~ 34814294 (-)
AMCG00020837 NA other upstream 627675 34838761 ~ 34841323 (-)
G66054 NA other upstream 651533 34862619 ~ 34865305 (-)
AMCG00020853 H2AFV,h2afvb,LOC107386217,LOC105007341,LOC107668744 other upstream 938482 35149568 ~ 35170179 (-)

Expression


Co-expression Network