AMCG00020815


Basic Information

Item Value
gene id AMCG00020815
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 34289987 ~ 34314712 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020815
ATGAATGGCCCCAGTGCAGTGATGGCGGCCATTGCTGAGACCTGCTCCGAATCAATATCAAGTGGAAATCGCTTTTCTACAAGCGGTGCAGAAATCCTGGCGGCGGAAAAAACACTCGCCagactgcgctgtctgacaAGGAGCAGGGATCGTCATCTCTCCTGCTGCATCTGCTCTGCTGTGGTACTGCTGCAGGGCATGGCAGCGCAGCGCAATACGAAGCAAGGAGGAGAAACAGGCTGGGAATCGGAGAGGGAGTGGGATGGGCGGCTGGGCGCCTCCTTGTTGCCAGGGCCAGGGAGTGGAGAGCTGCAGACGGCCCACCTCCTGGGCCTGCTGGTGCTGTGTGTGGGGATCTATGCGGAAGTGGAGCGGCAGAAGAACCGCACCCTGGAGGGGGTGTTCCTGGCGCCGGCCGTGGTGCTGATCCTGCTGGGGCTGGTGATGTTCTCGGTGTCGCTGGTGGGCATGTTCCTGTGCgtgctgtgtgtgctgctggCTCTGCAGGCAATCGCTCTGCTCGTGGCCCTGATCTTCGAGAGGAAGAGCAGCATCCGCGAGGGAATCAAGCACTACTATGACGACCTGGACTTTAAGAATATCCTGGACTTTTTTGCGTGCTGTGGGGGAGATGAGTACAAGGACTGGGCTGTCAATCAGTACCACTTCTGTAATGGCACGGGCCCGCTGGCCTGCGGCGTGCCCTACACCTGCTGTGTGCGACGCAAGGTGGTGGGAGAGGTGGTGAACACACTGTGTGGATACAAGACACTGGACAAGGAGCGTGTCGAGCTGGACGAGGTGATCTACGTGCGCGGCTGCATCCACGCCGTCAACCTGTGGCTGAGCGACAACGTGGGCGCCACCGTGGGCTTGTGCTTCGCCGTGGGCCTTCcgcaggtcagagACATGGTGGACTTCCGGTTTCTGCGCCGGGCCGGCTACCAGTACAGCGAGCTGGACCTGTCTGGGGCGGGCTGGTGCCTCTGTCTGCCCCGGGACGGTGGCTACCTCCCAGTCCCCGCCTCCGAGCCTGAGACCTGGGCAGACGAACCCCAGGAGGCCCCCGTCCTCGCCGGCCCACGGCCCAGCGCTCCCCCGGAAGCACCGCCTGGGGGGTCACAGGAAATCGGTGCCTTCGATGAAGTGGACAACCGGGCATAG

Function

GO:

id name namespace
GO:0016020 membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020815 True 1164 mRNA 0.62 11 34289987 34314712

Neighbor

gene id symbol gene type direction distance location
AMCG00020812 NA coding downstream 17821 34239889 ~ 34272166 (-)
AMCG00020813 NA coding downstream 69307 34216896 ~ 34220680 (-)
AMCG00020811 NA coding downstream 78901 34208909 ~ 34211086 (-)
AMCG00020807 NA coding downstream 176298 34112643 ~ 34113689 (-)
AMCG00020803 NA coding downstream 214383 34056954 ~ 34075604 (-)
AMCG00020821 tmem150a,LOC106585116,LOC106580507 coding upstream 118713 34433425 ~ 34441728 (-)
AMCG00020822 NA coding upstream 128574 34443286 ~ 34456490 (-)
AMCG00020830 NA coding upstream 204488 34519200 ~ 34522321 (-)
AMCG00020829 LOC106531303,LOC108443303,LOC103397456,LOC105014365 coding upstream 215071 34529783 ~ 34553326 (-)
AMCG00020828 NA coding upstream 254900 34569612 ~ 34573502 (-)
G65872 NA non-coding downstream 69977 34218759 ~ 34220010 (-)
G65867 NA non-coding downstream 74428 34215057 ~ 34215559 (-)
G65858 NA non-coding downstream 173044 34116606 ~ 34116943 (-)
G65845 NA non-coding downstream 236879 34052460 ~ 34053108 (-)
G65844 NA non-coding downstream 238918 34049996 ~ 34051069 (-)
G65915 NA non-coding upstream 101945 34416657 ~ 34420190 (-)
G65957 NA non-coding upstream 199656 34514368 ~ 34515898 (-)
G66001 NA non-coding upstream 432229 34746941 ~ 34747361 (-)
G66003 NA non-coding upstream 434415 34749127 ~ 34749329 (-)
G66004 NA non-coding upstream 434732 34749444 ~ 34750150 (-)
AMCG00020810 LOC103363194,LOC101160416,LOC107087288,LOC101481896,LOC107739988,LOC102234237,LOC107675956 other downstream 50290 34222315 ~ 34239697 (-)
G65756 NA other downstream 920882 33368625 ~ 33369105 (-)
G65679 NA other downstream 1398494 32886364 ~ 32891493 (-)
G65641 NA other downstream 1632968 32655134 ~ 32657019 (-)
AMCG00020774 snrpg other downstream 1679279 32607862 ~ 32610708 (-)
AMCG00020836 snrnp27,snut3,LOC106585104 other upstream 493892 34808604 ~ 34814294 (-)
AMCG00020837 NA other upstream 524049 34838761 ~ 34841323 (-)
G66054 NA other upstream 547907 34862619 ~ 34865305 (-)
AMCG00020853 H2AFV,h2afvb,LOC107386217,LOC105007341,LOC107668744 other upstream 834856 35149568 ~ 35170179 (-)
AMCG00020867 zgc:110197,arl3,LOC108263849,LOC106563294,LOC103033567 other upstream 1029994 35344706 ~ 35349499 (-)

Expression


Co-expression Network