AMCG00020822


Basic Information

Item Value
gene id AMCG00020822
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 34443286 ~ 34456490 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020822
ATGGACAGCTGTCTGTTATTTCCTCAGGCCTTTGCCCCCTCCCTTTCCTGCCGCTCACCCGGGTCTCCTGAGGATGGGCCTGAAGTGCTTGGCGGTCCTCACGGCGAAGATAGCACTGGGGATGAGGAATACGGTGCACCAGCCCAGGCAGAGCCAGGGTCCACCGTGTTCACGCACACTGTGGTGTACACGTTATCCAACGCCACGGCCAGCGGCAGGCAGGACAGGACCTTCGTAATGATCTGCAAGTACAAGAAAGACATTCCTCTCTTTTACTGTTACAGGCCCTCAGCAAAACTGGCAAACACCACACAAAGACACTGTCAGGCGAGCGATCGTGAGGTCCGCAGCACTCACTTGTACACCTCAGAGATGCTGAAGTTCATTCCCAGTTTGCTGATGTTCAGATACTCTGGGAGGTTTCTCGGATTATCAAGGAACTTGGAGGTGCAGGACACAGGGAAAGACGGGTTAGCAATGACAGAATCGAGCACACTGCGACACTGCCTGAGCCGCCACTGGGAGACGGGGGCAGCTGTGGGTCCTTACGCCATGAGTAGACGGGCCCCCGAGGCGGCCAGAACGCTGTCTTCATCGGTGTGCTGCCGAAGACCCAAGATGTTCAGTACCACGACCAGCAGGATCAAACAGCACAGTGCCAGCGCCACGGCCCACCTGCCACACACCCCCGCGAACGTCCCAAACTCAGAGTGGCCGGCAGGATTCGAAACAGTGATGTTCCTCAAGTCCTGTGCCACTCCCCCAGCGCAGCAGCAAgatgatgatggtggtggcgCCCGAGCAGGTTGCCATGGCGCCATGCTGGCACTTCAGATCCTGCTGGACCCGTCCCCCGCACTTCCCATGACAGCGGCAGCAGCAGAAGACAAGACCCACCAGGGGCACGACCAGCACGTAGAGCACCGCGATGATGGCGCACACCGTGTAGCCGGCCAGAAACTGGTGTACAAAGCCATACAGAGGTCCCAGCGAGCCTGCAGTGCTCAGGGTCTCGAGGGACACCTGCTGGTTTATATCGTGGAAACTGAGCTTCTCTGCGCCCCTCTGGCAGTACTGGGACCCCGCAGCGCTGGTCAGCAGCCACACGGAATCCGAAAAGCGCTGTTTGAAGCACGCCCGGCAGAGGGCATCATTGCAGCGTTACCTCGGCCTGCTAGTCAAGTTGTCATCGTGCAGCCACCTGCTGTCGCTGATTGGTGGCTGCGTTATAGTCCCCGATCAGGAACTCAACTTTTCATTGGACAACGCCACATCAATAACCCCCATCTCGTCCCGCCCCCTGCCGCCGGGGCATTATGGGACTTGCTGTGCACTGAGGCCTTCCTCCGCGGCTGTTCGGTCGTGCCCGGCTGCCTCCTAGAACTACAACTACCACAGTGCCCTGCGAAGAGCAGCGGCAGCGGGGGGTGGATTGCCCAACTCAGAGGCTATGGCACAGAAACGAAGAGCTGTTTTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020822 True 1479 mRNA 0.59 9 34443286 34456490

Neighbor

gene id symbol gene type direction distance location
AMCG00020821 tmem150a,LOC106585116,LOC106580507 coding downstream 1558 34433425 ~ 34441728 (-)
AMCG00020815 NA coding downstream 128574 34289987 ~ 34314712 (-)
AMCG00020812 NA coding downstream 171120 34239889 ~ 34272166 (-)
AMCG00020813 NA coding downstream 222606 34216896 ~ 34220680 (-)
AMCG00020811 NA coding downstream 232200 34208909 ~ 34211086 (-)
AMCG00020830 NA coding upstream 62710 34519200 ~ 34522321 (-)
AMCG00020829 LOC106531303,LOC108443303,LOC103397456,LOC105014365 coding upstream 73293 34529783 ~ 34553326 (-)
AMCG00020828 NA coding upstream 113122 34569612 ~ 34573502 (-)
AMCG00020832 NA coding upstream 263214 34719704 ~ 34728364 (-)
AMCG00020834 LOC105015180,LOC106568058 coding upstream 272637 34729127 ~ 34741671 (-)
G65915 NA non-coding downstream 23096 34416657 ~ 34420190 (-)
G65872 NA non-coding downstream 223276 34218759 ~ 34220010 (-)
G65867 NA non-coding downstream 227727 34215057 ~ 34215559 (-)
G65858 NA non-coding downstream 326343 34116606 ~ 34116943 (-)
G65845 NA non-coding downstream 390178 34052460 ~ 34053108 (-)
G65957 NA non-coding upstream 57878 34514368 ~ 34515898 (-)
G66001 NA non-coding upstream 290451 34746941 ~ 34747361 (-)
G66003 NA non-coding upstream 292637 34749127 ~ 34749329 (-)
G66004 NA non-coding upstream 292954 34749444 ~ 34750150 (-)
G66087 NA non-coding upstream 442294 34898784 ~ 34942966 (-)
AMCG00020810 LOC103363194,LOC101160416,LOC107087288,LOC101481896,LOC107739988,LOC102234237,LOC107675956 other downstream 203589 34222315 ~ 34239697 (-)
G65756 NA other downstream 1074181 33368625 ~ 33369105 (-)
G65679 NA other downstream 1551793 32886364 ~ 32891493 (-)
G65641 NA other downstream 1786267 32655134 ~ 32657019 (-)
AMCG00020774 snrpg other downstream 1832578 32607862 ~ 32610708 (-)
AMCG00020836 snrnp27,snut3,LOC106585104 other upstream 352114 34808604 ~ 34814294 (-)
AMCG00020837 NA other upstream 382271 34838761 ~ 34841323 (-)
G66054 NA other upstream 406129 34862619 ~ 34865305 (-)
AMCG00020853 H2AFV,h2afvb,LOC107386217,LOC105007341,LOC107668744 other upstream 693078 35149568 ~ 35170179 (-)
AMCG00020867 zgc:110197,arl3,LOC108263849,LOC106563294,LOC103033567 other upstream 888216 35344706 ~ 35349499 (-)

Expression


Co-expression Network